Vibrio cholerae O1 El Tor N16961: VC_1140
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Entry
VC_1140 CDS
T00034
Name
(GenBank) pseudouridine synthase family 1 protein
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vch03009
]
VC_1140
Enzymes [BR:
vch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
VC_1140
Ribosome biogenesis [BR:
vch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC_1140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
MFMR_assoc
Motif
Other DBs
NCBI-ProteinID:
AAF94299
UniProt:
Q9F855
LinkDB
All DBs
Position
I:complement(1208619..1209491)
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AA seq
290 aa
AA seq
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MKVFIIKQIEDNSLLSCSLNLFQGANDSRSRLYGKLSNTVYLHFCKVLNMSSRLSSDATS
SSSDQRKSHFKQRAAKNAGHPPTRANRKSVANKKKNATQTALSPKRPLSPAERKVILFNK
PYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQPQSKAP
KTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPPVRFRAAIPTTW
LAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREVTL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtatttataattaaacaaattgaagacaatagtctattatcttgttcgttaaac
cttttccagggcgcaaatgatagccgatctcgcctctacggaaaactttcaaacacagtt
tatttacatttttgcaaggtgcttaacatgtcatctcgcttgtccagcgatgccacctcc
tcttcttccgatcaacgaaagtcgcattttaaacaaagagccgcgaaaaacgctggccat
ccaccaacgagagcaaatcgaaagagtgttgctaacaagaaaaaaaatgccactcaaacg
gctttgtcacctaagcgccccctttctcctgctgagcgtaaagtgatcctgtttaataaa
ccttatgacactttaagccaatttaccgatggggatggaagaaaaaccttggccgactac
atcccaattaaggatgtttacgccgcaggacgtttggatcgcgatagcgaaggactactg
attttaaccaatgatggaattttgcaggccagattgactcagccgcagtccaaagcgcca
aaaacttactgggtgcaagttgaaggttcgccacaagagagcgaccttgaggcattgcgc
cacggagtgaccttaaaagatggcccgactttaccggcgaaagtcgacatcatgcccgaa
cccacgctttggccacgcaatccgccggtgcgttttcgcgcagcaattccgaccacatgg
ttagccattactttaatggaagggcgtaatcgccaagtacgacgcatgacggcgcacatc
ggtttcccgactctacgcttgattcgttactccatgggcgattggaacttgggagatttg
cagcccggtgagtggcgggaagtgacgctttaa
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