Vibrio cholerae O1 El Tor N16961: VC_1148
Help
Entry
VC_1148 CDS
T00034
Name
(GenBank) conserved hypothetical protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vch03000
]
VC_1148
Transcription factors [BR:
vch03000
]
Prokaryotic type
Helix-turn-helix
Other families
VC_1148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
HTH_29
Penicillinase_R
MarR
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AAF94307
UniProt:
Q9KSV8
LinkDB
All DBs
Position
I:complement(1219156..1220010)
Genome browser
AA seq
284 aa
AA seq
DB search
MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPVQINR
AVDLLTQAKRISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTDNDVIV
LISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSICLDVPEDTDVYMPMASR
VVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSRYDKLPPY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattagaaaaaattcaaaaaaacctggaaaactttagcaagtctgagcgtaag
gttgccgaagtgattatggcatcaccacaaaccgctattcattccagcattgctacactg
gcgaaaatggcggacgtgagtgaacctacggtgaaccgtttctgtcgccgccttgatacc
aaaggttttccggactttaaactgcatttagctcaaagccttgcaaacggcacgccttac
gttaaccgtaacgtagaagaggatgatggcccagatgcttacacccacaagattttcgaa
tcgactatggcgtgtctggatgtggcgaaaaacagtttggatcccgtgcaaatcaaccgt
gctgttgacctgctcactcaagcaaaacgtatttcgttttttggcttaggcgcgtcctct
gcggtcgcacgcgatgcacagaataaatttatccgcttcaatattccgatcagctgcttt
gaagatattgtgatgcagcgaatgagctgtatcaactgcaccgataatgatgtgattgtg
ctgatttctcatactggccgtaccaaaagtcaggttgaaatcgccaatcttgctcgtgaa
aacggagcaacggtgatcgcgattaccgctaaagattcaccactggacaaagccagttca
ttatcgatctgcttagatgtgcctgaagacacagacgtgtatatgccaatggcaagtcgc
gtagtgcaaatgaccgtgatcgatgtattggcaaccggctttacattgcgccgaggttca
ggctttagagaaaatctcaagcgcgtgaaagaagtgctgaaagattctcgctacgacaaa
ctgccgccttactag
DBGET
integrated database retrieval system
