Vibrio cholerae O1 El Tor N16961: VC_1258
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Entry
VC_1258 CDS
T00034
Name
(GenBank) DNA gyrase, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vch03032
]
VC_1258
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_1258
Enzymes [BR:
vch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VC_1258
DNA replication proteins [BR:
vch03032
]
Prokaryotic type
DNA Topoisomerases
VC_1258
DNA repair and recombination proteins [BR:
vch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VC_1258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Ins134_P3_kin_N
Motif
Other DBs
NCBI-ProteinID:
AAF94417
UniProt:
Q9KSJ8
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All DBs
Position
I:1330207..1332891
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AA seq
894 aa
AA seq
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MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT
NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV
YMRSKAEIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQL
LEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVV
TLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYR
MKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSLD
QFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQP
VLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYGKRT
SLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVG
RNTQGVTLIRTSEGESVVGLQRIDEIEESELPEGEEALVENDAPVAQDDDGEQE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacatcgaagacgagctacgcagttcg
tatttggactacgcgatgtcggttatcgtgggtcgtgctcttcctgatgtgcgtgatggc
cttaaaccagtacaccgacgcgtactgttcgcgatgaatgtgctgggcaacgactggaac
aaagcctataaaaaatctgcccgtgtggtaggtgacgtaatcggtaaatatcaccctcat
ggtgacagtgcggtttacgacaccatcgtgcgtatggcgcagcctttctcacttcgttac
atgttggtcgatggccaaggtaactttggctcgatcgacggcgactccgcggcggcaatg
cgttataccgaagttcgtatgtcgaaaatcgcgcacgaactcttggcagacctagacaaa
gaaaccgttgactacgttccgaactatgacggcaccgagcagatccctgcggtattgccg
acaaagatcccgaacctgctgatcaacggcgcatctggtattgcggtgggtatggcaacc
aacattcctccgcacaatttaggtgaagtgatcgatggctgtttagcctacatcgataat
gaagcgatcaccattgatgagttgatggactacattcctggtccagatttcccaaccgcc
gcgctgatcagtggccgtaaaggcatcattgacgcgtacaaaaccggccgcggcaaggtt
tacatgcgctcgaaagcggaaatcgaaaccgataagaacggcaaagaaaccattatcgtc
agcgaaatcccttatcaagtgaacaaagcgcgcttgatcgaaaaaatcgctgagttggtg
aaagagaaaaaagtcgaagggatcagtgcactgcgtgacgagtctgacaaagacggtatg
cgcattgtgattgagtgtaagcgtgatgcggttggcgaagtggttttgaacaacctgtat
gccaacactcagctgcaaaccaccttcggtatcaacatggtggcactcgataacggtcag
cctaagctgtttaacctgaaagagatgctgaagtgtttcgtcgaccaccgccgcgaagtg
gtgactcgtcgtactatttttgaactgcgtaaagcgcgtgagcgtgcccacatccttgaa
ggtttggcactggctctggctaacattgatgaaatcattgaactgatccgccgtgccgcc
acgcctgcagaagcaaaagaaggcttaattgcccgtggttgggatcttggcaacgttgcg
gcaatgcttgagcgtgcaggtacggatgcggcgcgtcctgagtggcttgagccacaatac
ggcatccgcgatggcaagtacttcctgactgagcaacaagcgcaagcgattctggatctg
cgtctgcacaagctgactggtctagagcacgagaagatcctcgatgagtacaagcagctt
ctcgaagaaatcgcggcattgatgcacattctggcgagcacagagcgcttgatggaagtg
atccgtgaagagctagaagcgattcgcgctggctttagcgatgcgcgccgcactgaaatc
acggcagcaacgcacgacatcgacatggaagagctgatcgctcgtgaagatgtggttgtg
actctgtcacacgaaggttatgtgaagtatcaattactgagcgactacgaagcacagcgt
cgtggtggtaaaggtaagagcgcaaccaagatgaaagaagaggactacattgagcgtctt
ctggttgccaatactcacgataacattctgctgttctcgactcgcggcaaaacttaccgt
atgaaggtataccaactgccgctcgccagccgtactgcgcgtggtaagccaatcgtgaac
ctgcttcctctggaagaaaacgagcgcatcaccgcgattctgccagtgactgagtttagt
gaagataaattcatcttcatggcaaccggtgacggtactgtgaagaaaacatcgctggat
cagtttgccaacgttcgtgcgaatggtttgattgcgctcaacctgcgtgacgaagactcg
ctgattggtgtggatatcaccgatggcgaaagcgaaattatgctgttctctaaattcggt
aaagtggttcgctttaaagagtccgaagaaaccgcggttgtggatgaaaatggtcaacct
gtgctggatgaaaatggccagccagagatcaagttcaaaggcgtaagaccaatgggtcgt
accgctgcgggtgttcgcggcatgaaactggctgatggcgaccaagtggtatcgctcatc
gtgccgaagaccgaaggtgacgtactcaccgtaactgaaaatggttacggcaaacgtacc
agcctatctgaatacccaaccaaaggtcgtggaactcagggtgtggtttcgatcaaagtc
tctgagcgtaacggcagcgttgtgggtgcagtacaagtggccgagggtgatgagttcatg
atgatcaccaatgccggtacactggtacgtactcgcgtggcggaagtgagccaagtgggc
cgtaatactcaaggcgtgaccctgatccgtacttcggaaggtgaaagtgtggtaggtctg
cagcgtatcgatgaaatcgaagagtcggaattgccagaaggtgaggaagcacttgtcgag
aacgatgcacctgttgcacaagatgatgatggtgaacaagagtaa
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