Vibrio cholerae O1 El Tor N16961: VC_1354
Help
Entry
VC_1354 CDS
T00034
Name
(GenBank) conserved hypothetical protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vch03009
]
VC_1354
Enzymes [BR:
vch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
VC_1354
Ribosome biogenesis [BR:
vch03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VC_1354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
TRM
Methyltransf_15
PrmA
MTS
Methyltransf_25
Methyltransf_10
CR6_interact
Motif
Other DBs
NCBI-ProteinID:
AAF94512
UniProt:
Q9KSA5
LinkDB
All DBs
Position
I:complement(1444812..1446068)
Genome browser
AA seq
418 aa
AA seq
DB search
MLFFISSTTIAAHFYFHLSSVMTPAIYLVKGRDKSLRRKHPWVFSRGISKVEGTPKLGET
VDVYSFEGKWLAKAAYSPHSQITARVWSFEQEPIDRDFFIKRIEQAQLLRNDIIERDGLT
GYRLIAAESDGLPGITIDKYQDYLVCQLLSAGAEYQKQTLVEALLHCFPECHIYERSDVA
VRKKEGLDERVGVLHGELPPKSVVIEENGVKISVDIVGGHKTGFYLDQRDSRFQSMKYVK
EKEVLNCFSYTGGFGLYALKGGAKRVINADVSQPALDTAKFNAELNGFDISKKRAVFLNA
DVFKLLREYRDQGTRFDVVVMDPPKFAESKAQLDGACRGYKDINMLAMQILNPGGTLLTY
SCSGLMDQVLFQKIIADAALDAGRDVKFVERFEQAADHPTDTAYPEGFYLKGFACKVL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
ttgcttttcttcatcagttccacgacaatagccgcccatttctatttccatctgagtagc
gtaatgactcctgcaatttatttggtcaaaggtcgagacaaatctttgcgtcgtaaacat
ccgtgggttttttctcgtgggatcagcaaagtcgaagggactcctaaactgggagaaact
gtcgatgtttactcctttgaaggcaaatggttagccaaagcggcctactcaccgcattca
caaattactgcgcgtgtctggagctttgaacaagagccgattgatcgcgatttcttcatt
aaacgcatcgaacaagcacaattattgcgcaacgatattatcgaacgtgatggcttaacc
ggttaccgtttaattgccgcagaatcagacggcttacctggcattactatcgacaaatat
caagattatttggtctgccaactactgagtgccggtgccgagtatcaaaaacagactctg
gtcgaggcattattacattgcttccctgagtgccatatttatgagcgttccgatgttgcg
gtgcgtaaaaaagaagggctggacgagcgcgttggggtactgcacggtgaattaccacct
aaatcggtcgtgattgaagaaaatggcgttaagatcagcgtcgatattgtgggtggacac
aaaacgggtttctatctagatcaacgcgacagccgcttccaatccatgaaatacgttaaa
gagaaagaagtgctgaactgcttctcttacacgggtggttttggtttatacgcactcaaa
ggcggagctaagcgtgtgatcaacgcagatgtctctcaaccagccttggatacggctaag
ttcaatgctgaattgaacggtttcgatatcagtaaaaagcgtgcggtgttcttgaatgcc
gatgtatttaaactgctgcgcgaataccgcgaccaaggcacacgttttgatgtggtggtg
atggatccccccaagtttgccgaatctaaagcccagctggatggtgcatgccgcggctat
aaagacatcaacatgctggccatgcagatcttaaacccaggtggcaccctgctcacctac
tcgtgttcagggttaatggatcaagtgctatttcagaaaattattgccgatgcggctctc
gatgctggacgtgatgtaaagtttgttgagcgttttgaacaagcggccgatcacccaacc
gataccgcttatcctgaaggtttttatctcaaaggctttgcttgtaaggttttataa
DBGET
integrated database retrieval system
