Vibrio cholerae O1 El Tor N16961: VC_1376
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Entry
VC_1376 CDS
T00034
Name
(GenBank) GGDEF family protein
KO
K20959
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_1376
Enzymes [BR:
vch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VC_1376
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE
Chordopox_L2
Motif
Other DBs
NCBI-ProteinID:
AAF94534
UniProt:
Q9KS83
LinkDB
All DBs
Position
I:1469402..1470967
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AA seq
521 aa
AA seq
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MIDNIIRKKWMLKHVRVIVPLLVLLFSLLLTVFVVYTAYSLQLRHNRTLLENLADRQTMA
LQQFVDGDIHFIGSAANFFRSSTSDDWVRFHTFAEETLKGSQSLIALQWLVKVEPPQAET
FTARMQQRFPEFTLYTVPKTGEIKYGFGTDDQAKYVLSDIYPLNYDNRKLLGFYSERERF
KRILADIVVNRRPNVSDKVRLLQDGIDKSIVKDGMLVYHPVFSSEDDRSLLGVMVGVVRL
STYFEKLVQISVMEQDLDMRVIDTGFDSEDSPVLYQSPMWRADDEPKIERKLVLPNRDWV
LEFELHQPINHSEEWVLLGLGLGGVIISLLLSYIMRMQLEEKQRLTDMIEERTAELRYLV
EHDSLTNIYNRRFFSQHLCKMLDEKQSFTLISFDIDRFKQINDSYGHLAGDYALTHVVDV
VKKELVESDIFARFGGDEFAILSSVTDETALYTYLERIRKVVEAEPVMLNAETPLTLTIS
IGASINCEYSEPEILQSVDDQLYLSKSKGRNRVSIAHNAAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatagataacataataaggaagaagtggatgctcaaacatgtgcgcgtgattgtgccc
ttgctggtactgttgttttctctgcttctgactgtgtttgtggtttacaccgcatactca
ttacagctgcgccataatcgtactctgctggaaaaccttgcggataggcaaactatggca
ctgcaacagtttgtcgatggtgatatccattttatcggctctgccgccaactttttccgc
tcaagcacaagcgatgactgggtgcgttttcacactttcgcagaagagactcttaaaggt
tcacaaagcctgattgctttacaatggttagtgaaagttgagccgcctcaggctgaaact
tttaccgcgcgaatgcagcaacgttttcctgagttcactttgtacacggtgccaaaaacg
ggagagatcaaatacggtttcggtacggatgaccaagcgaaatacgttttatcggatatt
tatccactcaattatgacaatcgtaaactgttaggcttttactcggagcgtgaacgtttc
aaacgaatactggcggatattgtcgttaatcgtcggccgaatgtttcggataaagtgcgc
ctgctacaagatgggattgataagtcgatcgtcaaagatggcatgttggtctatcaccct
gttttttcttcagaagatgatcgcagcttacttggtgtgatggtcggggtggtgcgccta
tccacctatttcgagaaactggtccaaatcagcgtcatggaacaagatctcgatatgcgc
gtgattgacaccggatttgattcggaagacagtccggttctttatcaaagcccgatgtgg
cgagcggatgatgaacccaaaatagagcgcaaattggtgttgccaaaccgtgattgggtg
ctggagtttgaactgcatcagccgattaaccatagtgaagagtgggtgctactgggctta
gggttgggtggcgttattatttctctgctgcttagctacatcatgcgaatgcaactggaa
gagaaacaacggctgacagatatgattgaggagcgtaccgcagagctgcgttatctggtg
gagcatgacagtttgaccaacatctataaccgccgcttctttagtcagcatttgtgcaaa
atgttagatgaaaaacaatcctttaccttgatttcatttgatatcgaccgctttaagcaa
atcaacgacagctatgggcatttagcgggggattacgctttaacgcatgtggttgatgtg
gtcaaaaaagagttggttgaatcggatatttttgcccgtttcggcggtgatgagtttgcc
atcttgtcatccgttactgatgaaacggcgctttatacttatctagagcggatccgtaaa
gtggtcgaagcagaacctgtgatgctcaatgccgagacaccattaaccttaaccatcagt
attggggcgagcattaactgtgagtacagtgagccggaaattttacagagtgttgatgat
cagctctatctcagtaaatcgaaaggtcgaaatcgtgtatcgattgcgcacaatgcagca
aggtag
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