Vibrio cholerae O1 El Tor N16961: VC_1392
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Entry
VC_1392 CDS
T00034
Name
(GenBank) deoxyribodipyrimidine photolyase, putative
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_1392
Enzymes [BR:
vch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
VC_1392
DNA repair and recombination proteins [BR:
vch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
VC_1392
Prokaryotic type
VC_1392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AAF94550
UniProt:
Q9KS67
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All DBs
Position
I:1483164..1484678
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AA seq
504 aa
AA seq
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MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSERHWRFVWQSLQ
AINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQEVGLACTFQRDLALAQWCQQ
HDIVWHEFPYAAVIRGAQTRKNWDEHWQQVMRSPCCDPDLTRANWLKLDAATLGLRSDIP
ATWQSKQAGMQTGGSDMAWATLEDFFARRGREYYRSISSPSLARHACSRMSPYLAWGNIS
LREMYQTLLKHWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQS
SDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHMNVDWRAGVTY
LAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQEHDSEGQFIHKWVPELAQVPV
PLLFEPWLMTPLEAQMYQVPLESPYLKPVMDLEASAKQARDRLWQWQKLPAVQAEAMRIL
ARHVRQAKPRTSPRQPNKRQPEMD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcaatctggtatggctcaaacgcgacctaaggctgaccgatcacgcgcca
ttacaagcggcgttaacttcggggcgaccgacgttactactctatctgtttgagccaatg
ctgcttggcgatgcgcattacagcgaacgacactggcgctttgtgtggcaatcattgcaa
gccatcaatcgtgatttggcgcagagtaaaggggaggtgttgatcgtcacatccgattgg
caaacctgctttgcacgtattgctgagcgctacgccattgaggcgatttattctcatcaa
gaagtcggtttagcctgcacttttcagcgcgatcttgcgctggcgcagtggtgccagcaa
cacgacatcgtctggcatgagtttccttatgccgccgtgatccgcggcgcgcaaacccgt
aaaaattgggatgagcattggcagcaagtgatgcgctccccttgctgcgatcctgattta
acacgcgccaattggctgaagctggatgccgcaacacttggtttgcgcagcgatatccct
gccacatggcagagtaaacaagcgggcatgcaaactggcggcagtgatatggcgtgggcg
acgctggaggattttttcgcgcgtcgagggcgagagtattaccgctccatttcaagtccg
agcttagcgcgccacgcgtgctcgcggatgtcgccttatcttgcgtgggggaatatctca
ctgcgggagatgtatcaaactttgctcaaacactggtcggtagcgggatttcgccgcagc
ctgattgcgctttcatcacgtctgcattggcactgtcactttatccaaaaatttgaatca
gaatgtgagatggagtttcgctgcgtcaaccgcgcttatgattcactcttacagcaatca
agcgatgcccccgccgcgcagttagcggcttggcaaactgggcacaccggcattccactg
gtcgatgcctgtatgcgttgcttaattcaaaccggatacctcaattttcgcatgcgcgcg
atgttggtgagcgtgttaactcatcatatgaatgtggattggcgagcgggcgtgacttat
ttggcgcaactgttcctcgattttgaaccgggcattcattatccgcagtttcaaatgcaa
gcaggggtcacgggtaccaatactatccgcatttataacccgaccaagcaagcacaagag
catgacagcgaagggcagtttattcacaaatgggtgccagagttggcgcaagtgcctgta
ccgctgctctttgaaccctggctgatgacaccgcttgaagcgcagatgtatcaagtaccg
cttgagagcccttacctcaagccggtgatggatttggaagccagtgccaagcaagcacgg
gatcgcttatggcagtggcagaaactgcctgcggtacaagccgaagcgatgcgtatcctc
gcgcgccatgtgcggcaagctaaaccgagaacttcgccgcgccaacccaacaagcgtcaa
ccggagatggattaa
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