Vibrio cholerae O1 El Tor N16961: VC_1416 Help Entry VC_1416           CDS       T00034                                  Name (GenBank) vgrG protein   KO K11904   type VI secretion system secreted protein VgrG Organism vch  Vibrio cholerae O1 El Tor N16961 Pathway vch03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vch00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     VC_1416  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vch02044]     VC_1416 Secretion system [BR:vch02044]  Type VI secretion system   Imp/Vas secretion system core components    VC_1416 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ACD Phage_GPD Gp5_trimer_C Phage_base_V DUF6484 DUF2345 Phage_Mu_Gp45 Motif Other DBs NCBI-ProteinID:  AAF94573 UniProt:  Q9KS45 Structure PDBPDBj LinkDB All DBs Position I:1510278..1513769 Genome browser AA seq 1163 aa AA seqDB search MATLAYSIEVEGLEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQM VDKRAELKLYRNSQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQK QTVPEILSILLQEMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHE AGKHTLYFSDASDSLSKLPEPIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKK PAYSFLQTVQGTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNE PLLRAGYKFDLQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHL HWRAEPQPKPQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQ GWAGSQYGFIAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTE THQGEGFNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHN QHLTVEWESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVVIEAGSEITVK AGGSFVKVDPAGVHLSGALVNLNSGGSAGSGSGFGGAMPALPGGLEPAVALAPPQTISYQ ALLQAEQANVPAVKVCPLAAQEATPAVNSITPPPPPPIAPPMAPPQPIMNPQPTANAQPN LGRSTKATPDFPTHFPKSSIGIENELAGLVVAMPANSAQKFGYVKSAQGDALFMLTKDMN QGSYQRPPSLQDGKNYQNWQTHTVELVSYPCEMDDKAAVETRKQAMLWLATHFTTHIDQS NHQPLAPIQSEDGRFVIEITNAKHVIAAGNGISAESQGQTITMTPSGQQATVGVAAKGFG TSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAELAKKF GIYINEWDPMSEQITPNANGLTDPKVKNAWEILPRTKPSKIVEILSKSDAKAVMKHIKPQ LQSRYSESLSKNVFQYFQDGGEVAGHGINNATVGDKHSPELAILFEFRTVPNELQSYLPK TESTTKSEVKLLDQFDPMKRKTVIQQVESLVQNSGDAFDKWYQSYRDSMNQPPVKNAKKI ASANQKAQWVKEHNPQEWQRIIA NT seq 3492 nt NT seq  +upstreamnt  +downstreamnt atggcgacattagcgtacagcattgaggtggaagggctggaagatgagactctggtggtc agaggcttccacgggcaggagtcactctctaatagtgtttttttagggcaagcctgttac gggtttcgctacgaagtgcaactggcgagtcgggtatcaaacctcaccgccgagcagatg gtggataagcgtgccgagctcaagctttaccgcaactcacagttggtgcagcgcgtgcac ggcattgtgcgtgctttcagccaaggcgatatcggccatcaccacaccttctaccaactc actttagtccctgccttagagcgcttatccctgcgtcataacagccgcattttccaaaag cagactgtccctgagattctctctatcttgctgcaagagatgggcatcaacgattacgct tttgcgctcaaacgtgatggcgtgcagcgtgagttttgtgtgcagtaccgcgaaagcgat atcgactttctgcaccgcctcgccgctgaagaaggtttggtgtacagctttgtccatgaa gcgggcaaacataccctctatttcagtgatgccagtgatagcctaagcaaactgccggag cctatcccatacaacgctttagtcggtggcgcgatagataccccgtatatccacggctta acctatcgcacccaagcagaagtgagcgaagttcagctcaaagactacagcttcaaaaag ccagcctactcctttttgcaaaccgtgcagggtactgagctggattatcagcaaacgcgc taccaacattttgatgcgccggggcgctacaaagacgatgtgaacggcgccgcctttagc caaatccgtttagactacctgcgccgccatgcccataccgcaacagggcagagcaacgag ccgctgctgcgtgccggctataagtttgacctgcaagagcaccttgaccccgcgatgaac cgcgattgggtggtagtgtcgattaaccaccaaggtgagcagccgcaagcgctacaagaa gacggtggcagcggcgctactacttacagcaatcagttcagcttaattccggggcatctt cactggcgcgccgagccacaacccaaaccgcaagtcgatggtccaatgattgccacggtc gtcggtcctgaaggcgaagaaatcttctgtgatgaacatgggcgggtgaaaatccatttc ccgtgggaccgttactcgaacggtaacgagcaaagctcctgttgggtacgggtgtcgcaa ggttgggcgggcagtcagtatggctttatcgctattccgcgcatcggccatgaagtgatt gtagagtttttaaacggtgacccagaccaaccgattatcactggccgcacttatcatgcg accaacacgccgccatacaccttgcctgagcacaaaaccaaaaccgtgctgcgcaccgag acgcaccaaggggagggctttaacgagctcagttttgaagaccaagcgggcaaagagcaa atctacctgcatgcgcagaaagattttgatggtttgattgaaaacgaccacaccacggtc attcgtcacgaccatcacctgaccgttgaaaacgaccaatttacccagattaagcacaac caacacctgacggtggagtgggaaagtcgagaagcggtaacgggcgagcaagtgctgagt attgaaggctcgctgcatgtgaaaacaggcaaagtttgggtcaatgaagcgggtacagag atccatgtaaaagcgggacagaaagtggtgattgaagcgggctccgagattaccgttaaa gcgggcggcagctttgtgaaagtcgatccggctggggtgcatctgtccggtgctttggtc aatctcaactctggcggcagcgctggtagtggtagcggctttggcggtgcaatgcccgcc ttaccgggcggcttagaacccgccgtggcactggctccaccgcaaaccatctcttaccaa gcgttgctacaggccgagcaagcgaatgttcctgcggtgaaggtgtgtcctttagccgct caagaagcaacgcctgcggtgaatagtatcacgccgcctccaccaccaccgattgctccg ccaatggccccaccacaaccaataatgaatccacagccaaccgctaacgcgcagcctaat cttggaagatccactaaggcaacgccggattttccaacacatttcccgaagtcatccatt ggcattgagaatgagttagctggtctagtggtggctatgccagccaactcggcacagaaa tttggctacgtgaaaagtgcacaaggtgatgcgctgtttatgttaacgaaagacatgaac caaggttcgtatcagcggccaccttcattacaagatggaaaaaattatcagaattggcag acgcatacagtagagttggtgagctacccttgtgaaatggacgataaagctgccgttgaa acacgcaaacaagccatgttgtggttagcaacccactttactacgcatatcgaccagtcc aatcatcaaccattagctcctattcaaagtgaagacggacgctttgttatcgaaatcact aatgcgaagcatgtgattgctgcgggcaatgggatttctgcagaatctcaaggtcaaaca atcacgatgacaccaagtggacaacaagccacagtgggtgttgctgctaaaggtttcggg acgagtgcaacgccagaattaaggttacttgaatcggcaccttggtatcagaaatcactc aagagccaatttgcatctctaacgagcgcagaaaacttggatgataaagagttagctgca aacgtatttgcttatctgacgtctatttatttaaaaacagcagagctagcgaagaagttt ggtatttacatcaatgaatgggaccccatgtcggagcaaattactccaaatgcgaatgga ttaacggatccaaaagtaaaaaatgcatgggaaatattgccacgtacaaaaccaagcaaa atagtagaaatactcagtaagagtgatgccaaagcggttatgaaacatatcaagcctcaa ttgcagtctcgctattctgagagtttgtcgaaaaatgtatttcaatatttccaagatggt ggtgaagtagccggacacggtattaataatgcgacggtcggtgataaacatagtccggaa ttggcgattttgtttgagttcagaactgttccgaatgaactgcaaagttatttgcctaaa acagaatcgacaactaagtcagaagtgaagttactcgatcagtttgatcctatgaagcgt aaaacagtaattcaacaagtagaatcgcttgtgcaaaatagtggcgatgcatttgataaa tggtaccaaagctaccgagactccatgaatcaacctcccgttaaaaatgcgaagaaaatt gcttccgcgaatcaaaaagcacaatgggttaaagagcataatcctcaagaatggcaacgc attattgcttag

DBGET integrated database retrieval system