Vibrio cholerae O1 El Tor N16961: VC_1448
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Entry
VC_1448 CDS
T00034
Name
(GenBank) RTX toxin transporter
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VC_1448
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vch02000
]
VC_1448
02044 Secretion system [BR:
vch02044
]
VC_1448
Transporters [BR:
vch02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VC_1448
Secretion system [BR:
vch02044
]
Type I secretion system
RTX toxin transporter
VC_1448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
AAA_16
SMC_N
AAA_22
DUF87
AAA_18
nSTAND3
DEAD
ABC_ATPase
AAA_29
AAA_5
RsgA_GTPase
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AAF94605
UniProt:
Q9KS14
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All DBs
Position
I:complement(1546757..1548919)
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AA seq
720 aa
AA seq
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MIGCRPFKNAVIHRRNNLMISNNERLTLICIHFYLSIISGNREKIKDESHLTDTENFKEE
LDKIQKEHKVKIRTKISQFKNIESLKTPAILFDQHDLPFITAKTNKDKCLIQRPNKETPE
VISSHELNSTWNKKSLVIQQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALISPL
FFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQ
HLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPL
TGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFI
RRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAF
NMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTISGAISFKNIL
FRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLN
HINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMG
YDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARG
RTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEEASA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgataggatgccgccctttcaaaaatgctgtaatacatcggcgaaataatttaatgata
tccaacaatgaaagactcacgctgatatgcattcatttttatttaagtatcatcagcggt
aatcgagaaaaaataaaagacgaaagtcatttaactgacactgaaaacttcaaagaagaa
ctggataaaatacagaaagaacacaaagtcaaaatacgcacaaaaatttcacaatttaaa
aacatcgaatcactaaaaacacctgcaattttatttgatcagcacgacttaccatttatt
acagcaaagactaataaagataaatgtttaatacaaagacctaataaagaaactcccgaa
gttatctcttctcacgaacttaattctacttggaataaaaaatcgttagtaatacagcaa
gcacaatcgcgctttgatatcacttggttcattcctgaattcctccagcataaaagagtg
ctgagcgaaattcttttattttcgttcgtgctgcaaattctggctctgatctcacctctg
ttttttcaagtggtgatggataaagtgctggtccaccaagcttggtcgacgttggatgta
ctggtatttggtctagtgattacaggggtgatcgaagtggtgttacgcggattgcgcgaa
tatcagtatgcccataccgccaaccgaattgacatacagcttggactcaaactggtgcag
catctgtttggactgccgctcatgttttttaaatcacgccaagtcggcgcgattgtcacg
cgtgtgcgcgagctcgacaccattcgcgagtttttgactggctctatgtttaccttaacg
gtcgagctactgtttatgttcgtctttctttacgtcatgagcttactttctgctccgctc
acagggctatttatcgctactgtgccctgttatgtccttctcgcttggtggctcacacca
agaatgcaggcggcgattgaaaagcagttttcacatgctgcggcaaatacctcatttctc
actgaaaccgtagccggtagtgaaacgctgaaaagtttggcggttgagccgcgatttatc
cgacgctgggatgaacaaaccgaaaaaatggtcacaacgggttatgacgtccagcagctt
aataaccgttctaaccatttagtgcagttgctgcaaaaaatcaccagcgtcgccatttta
tggttgggggcgacggaagtgctctcacttgagatgaccattggtcaactgatcgctttc
aacatgatgaccaaccacattgcgcagcccttagcgcggatggtcgagctgtggggacaa
tttattcaaactcgggtcgccatcgagaagctcggcgatatgcttaacctaccagtagaa
caacacacagggagtgacaatgtcactataagcggcgctattagtttcaaaaacatcctc
tttcgttatcaaccggatattcctcctaccattaatgatttgtcgctagacatccgtgca
ggtgaaacattgggggtggtcggcacctcgggctcaggcaaaagcaccctcgcccgtctg
ttgttgcgactttatagccctgagcaaggcagtattaccattgacggcattccactcaat
cacatcaatgttcaacagctcagacagcgagtgggtgtggtattgcaagagaacttttta
tttcacaaaagcgtgagtgaaaatattgcccaatctaagcctgaggcaagtttggaagag
atcattgaggctgcaaaactctcgggcgcacatgacttcatcctcaaacttcccatgggt
tacgacacggtattagcagaaggtggtcaatcgctttcaggtggtcaacggcagcgtctc
gcgattgcacgcacccttttatcagatccgaaagtgctgattttggatgaagcaaccagt
gcgctggatgacgaatctcaagccgtcattcaagccaatatggccagcattgccagaggc
cgtacggtgatcacgattgctcatcgcttgtctacggtgcgtgattgcgatcgcatcata
gtgcttcatcagggcacgattgttgagcaaggctcacaccaacaattactcgcctacggc
aaacaatacaaacagttatggcagcttcagcaagagctcaaacaagaggaagcctccgca
tga
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