Vibrio cholerae O1 El Tor N16961: VC_1652
Help
Entry
VC_1652 CDS
T00034
Name
(GenBank) response regulator VieA
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_1652
Enzymes [BR:
vch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VC_1652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AAF94803
UniProt:
H9L4Q6
LinkDB
All DBs
Position
I:complement(1780981..1782735)
Genome browser
AA seq
584 aa
AA seq
DB search
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDG
ISLLSQLSLQAPKLGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEG
FQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
LPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
TCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQILLVDNHMLSATALQKVLNKEE
NVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGALLVLHDGL
TAEAQEDEPKAIVVKANTLMETSSRILLQAQQSNVRPQAQQEELAQLSERELTVAKMLVE
GLTNKEIALQLDINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgatagtagaagatgatcgaattcaggcgactagcctgaagctcaagcta
agacagcttgggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactg
tgtaacaaagtgggtatcgatttgatgttttgcgatattcgaatgccgcagatggatggg
atcagtttgttatcacaactgagtttacaggcacctaagctaggtgtggtgatactcagc
gctgtggaagatacgattcttgagttaacccacaacatgtgtagtttggctggatttgct
tatgttgatcgcctacctaagccctacgaagtggaggatttacagcgtgttgtcgagggg
tttcaaaagcaaacggagcccgaaaccagtcacaaacctgcaatcacgctaacctgtgac
gagattgaacaagcttttctgcacgaccatatttttaattactatcaaccacagtttgat
tttcgcagtggggcgatggtcggcgttgaagcgctagtacgttacgagcacccaactcat
ggcatgttaagcccagcagtgtttctgcctttaattgagcagtgtggcttgcatgagaaa
ctcttccttaccgtattagaaaagtcggtctctgcactggccagtattggtgctgacttg
cagctttccgtcaacatcagccagcgcaacttgcaacactcaatctgtgatcccattctc
gccatctgtgagcggtatggttttcccgcaagcaaactgactctagagatgacggagcat
gaggtgtacaacggaaccccgacctcattggccaaccttgctcgactgcgaatgtatggc
gttgggctatcgattgatgattttggtacgggttacgcgtcattaggtcaactggctcaa
ctgccttttacggaactcaagattgatcgcagctttgtgcatgacttggcaaccaactac
aaacaccaacaattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgc
gtcgtcgaaggggtagagaacgaagaaacatggcaatacttgcgtcaacttggggtagat
acttgccaaggttactacgccgctaagcccatgccgattgctcagttgagcgaactttac
actaaaaatcgtcgtcagtgtttaggttgtcaaagcatggatgatggctggcaaatcttg
ctggtggataaccatatgctcagcgccacggcattacaaaaagtgctcaataaagaagag
aacgtcagcaaggtgtttgtggcgcaagatattgagcagacgctgcacaaactgcgcgat
ttaccgatcaacctgctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggca
tttcacgagttgcttgagccttactatcgaggggcgctcttggtgctgcatgatggatta
accgctgaagctcaagaggatgagcccaaagccatcgtcgtcaaagcgaatactttgatg
gaaaccagctcccggatcttactgcaagcgcagcagagcaatgtgcgcccacaggcgcaa
caagaagagcttgctcagctttctgagcgagagttgacggttgcgaaaatgttagttgaa
ggtctaacgaataaagaaatcgccttacaactcgatatcaaccaaaaaacagtaagcact
tacaagactaggattatgaccaagttagggattaaatcggccatggaattggtgcgtttt
gtaacattaaaatag
DBGET
integrated database retrieval system
