Vibrio cholerae O1 El Tor N16961: VC_1845
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Entry
VC_1845 CDS
T00034
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VC_1845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_1845
Enzymes [BR:
vch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VC_1845
DNA repair and recombination proteins [BR:
vch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VC_1845
RecFOR pathway proteins
VC_1845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_14
AAA_3
AAA_22
nSTAND3
Rad17
TIP49
NTPase_1
AAA_18
RNA_helicase
DUF815
AAA_17
TniB
Bac_DnaA
Sigma54_activ_2
ABC_tran
AAA_24
NB-ARC
AAA_28
TsaE
bpMoxR
NPHP3_N
AAA_PrkA
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AAF94993
UniProt:
Q9KR02
LinkDB
All DBs
Position
I:complement(1984896..1985900)
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AA seq
334 aa
AA seq
DB search
MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAAQMRQEALDHL
LIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV
QRLEYYKVADLQHIVQRSAQCLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKG
DGHICAQTADRALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE
DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGIEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtttaattgctccaatcagcaaccacttcaaagatgaggaagtg
attgatcgagcgattcgtcccaaaaagcttgccgattaccaaggtcaagatcatgttcgt
gatcagatggaaatcttcattcaagcggcacaaatgcgccaagaagccttagatcatctg
ctgattttcgggcctccgggcttgggtaaaaccaccttggccaacatagtcgctaacgaa
atgggcgtgaatattcgtactacttcaggtcctgtattggaaaaagcgggagatttagcg
gcactgctaaccaatcttgaagaaaacgatgtgctgtttattgatgaaatccatcgtctg
agcccaatggttgaggaagtactgtatcccgctatggaagattaccaactcgatatcatg
attggtgaaggcccagctgcacgctcaatcaaaatcgatctccctccttttactttaatt
ggagccaccacacgtgcaggctcgctgacttcaccactgcgtgaccgatttgggattgtg
caacgattggagtattacaaagtcgccgatttacaacacatagtgcaacgtagtgcacag
tgtctcggtctttcgatggatagtgagggcgctcttgaagtggctcgccgtgcacgtgga
accccacggattgccaatcgcctgctgcgccgggtacgagattatgccgaagtaaaaggg
gatgggcacatttgtgcgcaaaccgctgacagggcactcaatatgcttgatgttgaccat
caaggctttgattacatggatagaaagctgctgttagcaataatggaaaagttttcaggt
ggcccagtcggaatcgataaccttgcggcagctattggcgaagagaaagatacgatagaa
gatgttcttgagccatttctcattcagcagggttatttacaacgtacaccacgcggtcgt
atcgcgacagatcgcgcttatttgcatttcggtattgaaaaataa
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