KEGG   Vibrio cholerae O1 El Tor N16961: VC_1854
Entry
VC_1854           CDS       T00034                                 
Name
(GenBank) porin, putative
  KO
K10940  outer membrane protein OmpT
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_1854
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vch02000]
    VC_1854
Transporters [BR:vch02000]
 Other transporters
  Pores ion channels [TC:1]
   VC_1854
SSDB
Motif
Pfam: Porin_4 DUF2490
Other DBs
NCBI-ProteinID: AAF95002
UniProt: Q9KQZ3
LinkDB
Position
I:complement(1992727..1993833)
AA seq 368 aa
MENHLQKTGNRTRNSHIKKRQWINMKKTLLALAVLAAAGSVNAAEILKSDAGTVDFYGQL
RTELKFLEDKDPTIGSGSSRAGVDANYTVNDSLALQGKVEFALKDSGDMYVRNHILGVKT
NFGKFSFGKQWTTSDDVYGADYSYFFGGTGLRYGTLSDALHDSQVKYVYEADSFWVKAGY
GFPEDNAKQELAELYVGATFGDLAVHAGGGQNRDKAFKVGSNTVGTTTTDIKADVTNSYF
EVTGEYTIGDALIGVTYYNAELDVENNPLVIDEDAISVAGTYKVADKTKLYAGYEYVMQE
ANTGADEDGTLVYLGVEYKFASWARVYAEYGYGDGTTLGYTNKGSDAEVKATKVDSANNF
GIGARIYW
NT seq 1107 nt   +upstreamnt  +downstreamnt
ttggaaaaccaccttcaaaaaacagggaaccggacaaggaattcccatattaagaaaagg
cagtggattaacatgaaaaaaactctattagcactcgcagtgcttgcagccgcaggctct
gtaaacgcagctgaaattctaaaatcagatgctggcacagttgatttttacggtcagcta
cgtacagaattgaaattcttagaagataaagatccaacaattggttctggttcttcgcgc
gctggtgttgatgcaaactacaccgttaacgatagcttagcgttacaaggtaaagtggaa
ttcgcactaaaagacagtggcgatatgtatgttcgtaaccacattcttggtgtaaaaact
aattttggtaagtttagctttggtaaacaatggactacatctgacgatgtatacggtgct
gactactcttatttctttggtggtacaggtcttcgttacggcacactgtctgatgcacta
cacgattctcaagtcaagtatgtttacgaagctgacagcttctgggttaaagctggttac
ggttttccagaagataatgcaaagcaagagctagcagaactgtatgtaggtgcaacattt
ggtgatttggctgtgcacgctggtggtggtcaaaaccgtgataaagcattcaaagttggt
agtaatacggttggcacaacaaccacagatattaaagctgacgtaacaaatagttacttt
gaagtgacaggtgagtacactattggtgatgcactgattggtgttacttactacaacgca
gaactagatgtagaaaataacccactagtgatcgatgaagacgctatttctgttgctggt
acatacaaagttgctgacaagacaaaattgtatgctggctatgagtatgtaatgcaagaa
gcgaacactggcgcagatgaagatggtactcttgtttacctaggtgttgaatacaaattt
gcaagctgggctcgtgtatatgctgagtatggctacggcgatggtacaactctgggttac
accaacaagggttctgacgcagaagttaaagcaacgaaagtcgacagcgctaataacttt
ggtatcggtgctcgtatctactggtaa

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