KEGG   Vibrio cholerae O1 El Tor N16961: VC_1888
Entry
VC_1888           CDS       T00034                                 
Name
(GenBank) hemolysin-related protein
  KO
K20951  extracellular matrix protein
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_1888
SSDB
Motif
Pfam: Beta-prism_lec FG-GAP_3 PQQ FG-GAP
Other DBs
NCBI-ProteinID: AAF95036
UniProt: Q9KQW0
Structure
LinkDB
Position
I:2035185..2037260
AA seq 691 aa
MKQTKTLTAISVLALSHLMTQSTAFASSSSDIQTKLKWSWSTSVFHPESNQVMAAPIVVQ
LNDDNGDGKIDEKDVADIIVVTFEGNKYANGGYIRALSGVDGSELWSYSNGGVIADARYA
PAAADLDGDGLIEIVSTSALTPYINILDHQGNIKKQLLKSASGWRSVGDIALADINGDGN
IEILAADGVYSYESGLLFSHDWAPSSIAFDSNGDGQREVFANGTLYQNNGAYLWQYQAND
TVWFSSVANLDGDDKPELVVSVPASLSTPENSEIAVLEHDGSVKWRVNNLSNPGGSVQAV
SSFLGKPSSSATTVDAQSAVYGYTDWAHQQRVLAENHQLAIRSGAVVDAIGANSQNMIGG
SGGSLSTIDTSKVRAIDVTYGKNKYTWKYGVLEMSFTLDNGAKVTVGSKDSAFTYLGLEW
KTKTVPYLGVEWRTKTVSYWFFGWHTKQVAYLAPVWKEKTIPYAVPVTLSKSTTVRYDIP
QGSQLLGMNVWSKEKHLFKHKQQVNAVQFLVGKVTADQSHMGIVYAGYYAVDMYDAQGNK
VWSVANDDLNSGKIGVSAYDFTGDGIDEVLVQDRLRMRILDGQTGRVMGIIANSSGTLWE
YPVVADLEGNNNASLIMVANDYDRESQVNHGVFVYESANPSKPWRNATRIWNQYAFNFSD
INANGTIPTNAQPSWLTHNSFRSATIRVPLK
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgaaacagacaaaaacgttgaccgcgataagcgttctcgcgttgagccatttaatgact
caaagcaccgcattcgcgtcaagcagcagtgatatacagaccaaattgaaatggtcttgg
tctaccagcgtttttcatcctgagtccaatcaggtgatggccgcgccaattgtcgtacaa
ctcaacgacgataatggcgatggcaaaattgatgagaaagatgtggctgacattattgtg
gtcacctttgaaggtaataagtacgcgaatggtggttatatccgcgccctgagcggtgtg
gatggctctgaattgtggagttatagcaatggaggcgtgattgccgatgctcgctatgca
ccagcagccgcggatctcgatggtgacggactgattgaaatcgtctccaccagcgcgttg
acaccttatatcaatattctggaccaccaaggcaacatcaaaaagcaactgctgaaatct
gcttcaggctggcgttctgtaggtgatattgcactggcagacattaatggcgatggcaac
attgaaattctggctgccgatggtgtttatagttacgaatcaggcttgctctttagtcat
gattgggcaccaagttcgattgcgtttgatagcaatggcgatggccaacgtgaagtcttt
gccaacggtacactctatcaaaacaacggcgcttacctatggcaataccaagccaatgac
accgtttggttctcttccgtagcaaaccttgatggcgatgataagcctgaactggtcgtg
tcggttccagcgtctttgagcacacccgagaacagtgaaatcgctgtgcttgagcatgat
ggctcagtgaaatggcgagtcaacaacctatctaacccaggtggtagcgtacaagccgtc
tccagttttctgggtaaaccaagctccagtgcaaccactgttgatgctcagtctgccgtt
tatggctacaccgactgggcacatcaacaacgtgttctcgcagaaaatcatcagttagcg
attcgttctggtgctgtagtcgatgcaattggtgctaatagccaaaacatgatcggcggc
agcggtggctcactgagcacaattgataccagtaaagtccgtgccattgatgtgacttac
ggtaaaaacaaatacacctggaagtatggtgtcctcgagatgagttttactctcgataac
ggcgcaaaagtcactgtggggtcaaaagattctgcgtttacttatctaggattagagtgg
aaaactaaaacggttccttatctaggtgttgagtggcgtaccaaaaccgtctcttactgg
ttctttggctggcacactaaacaagtggcttatttagcgccagtatggaaagagaaaacc
atcccttatgccgttcctgtgacactgtcgaaatcgaccacagtacgctatgacattcca
caaggctcacagctcttgggtatgaatgtatggagtaaagagaaacacctctttaaacac
aaacagcaagtcaatgcggtgcagttcctagttggtaaagtgactgctgaccaatcacac
atgggcattgtgtacgcgggttactacgcggttgatatgtacgatgcgcaaggcaacaaa
gtgtggtctgtggctaacgatgacctgaacagcggcaaaattggtgtctccgcttacgac
tttaccggtgatggtattgatgaagtgttggttcaagatcgtttgagaatgcgtattctc
gatggccaaacgggccgtgtgatgggcattattgcgaactcttctggcaccttgtgggaa
tacccagtcgtggcagacttagaaggcaacaataacgcttcactgatcatggttgccaat
gactacgatcgcgaaagccaagtcaaccacggtgtgtttgtgtatgagtccgccaatcca
agcaagccttggcgaaatgcgactcgtatctggaaccagtacgcgtttaatttctcagat
attaacgccaacggtactatcccaacgaatgcacaaccaagctggttaacccacaacagc
ttccgttcagcgaccattcgcgttccgctgaagtaa

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