Vibrio cholerae O1 El Tor N16961: VC_2135
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Entry
VC_2135 CDS
T00034
Name
(GenBank) sigma-54 dependent response regulator
KO
K10943
two-component system, response regulator FlrC
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch02020
Two-component system
vch02040
Flagellar assembly
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VC_2135
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_2135
09142 Cell motility
02040 Flagellar assembly
VC_2135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
vch02022
]
VC_2135
02035 Bacterial motility proteins [BR:
vch02035
]
VC_2135
Two-component system [BR:
vch02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
VC_2135
Bacterial motility proteins [BR:
vch02035
]
Flagellar system
Flagellar assembly proteins
Others
VC_2135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
Mg_chelatase
HTH_20
MCM
AAA_16
MerR
HTH_24
HTH_11
AAA_7
AAA_19
HTH_28
FleQ
DUF2089
AAA_3
HTH_5
AAA
HTH_Crp_2
Sigma70_r4_2
HTH_10
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
AAF95280
UniProt:
Q9KQ67
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Position
I:complement(2288709..2290148)
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AA seq
479 aa
AA seq
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MKMAQSKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMA
GMGGLALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKPFAPEVLLNMVSRY
APVKSDDNGDAVVADTKSLKLLALADKVAKTDANVMILGPSGSGKEVMSRYIHNASPRKE
GPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLNLQ
AKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQYVQAGHFREDLYYRLNVFPLTWP
ALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAITKLLNYPWPGNVRELDNVVQRALI
LSENGHIQSEHILLEGVDWHDASSLQQAVAGESMAAPQIKPVAEPEVFKPLVQGGGQNSS
SQSSGLGGELRDQEFAIILDTLAECQGRRKEMAEKLGISPRTLRYKLAKMRDAGIDIPG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatggctcaaagcaaagtcttaatcgtagaagatgacgaaggtcttcgcgaagcg
ttgatcgacaccttagctttagcgggttatgagtggctggaagccgattgtgcagaagat
gccctgctcaaactcaaatcacacagtgtcgatattgtggtgtctgatgtgcaaatggca
ggcatggggggactcgctctgctgcgcagtatcaaacagcactggccgaatttacccgta
ctgctgatgaccgcttacgccaatattcaagatgccgtatctgccatgaaagatggcgcg
attgactacatggctaagccttttgcaccagaagtgctgctgaatatggtcagccgttac
gcaccagtaaagtcagatgacaacggcgatgctgtggtcgcggatacgaaaagcctcaag
ctgcttgccttagccgataaagtggcgaagaccgatgccaacgtgatgattttggggcca
agcggctcaggtaaagaagtgatgtcacgttacatccacaatgcctctcctcgtaaagag
gggccatttattgcgattaactgcgcggcaattcctgacaacatgttagaagcaacccta
ttcggttatgaaaaaggcgcgtttaccggagccgtacaagcgtgtcccggtaagtttgaa
caagcccaaggtggcaccattttgctcgatgagatcagcgaaatggatctgaatctgcaa
gcgaaactgctgcgggtactgcaagagcgtgaagtagagcgcttagggagccgcaaaagc
atcaagctcgatgttcgcgtgctcgcaaccagtaaccgtgacttgaaacagtatgtgcaa
gccggacatttccgtgaagacttgtactaccgtttgaatgtgttcccattaacctggcca
gccttatgtgagcgtaaagacgatattgagccgctggctaaccatctgattgagcgtcac
tgcaaaaagttaggtttacctgtaccaagcattgcgcctaacgccattactaaactgctg
aattacccatggccgggtaatgtgcgtgagctggataacgtcgtgcagcgtgctttgatc
ttaagtgaaaacggccatattcaaagtgagcacattttgctggaaggggttgattggcat
gatgccagcagcttacagcaagcggtggcgggagagtcgatggctgcgccgcagatcaaa
cctgttgcagagcccgaagtgtttaagcccttagtgcaaggtggtgggcaaaacagtagt
tcgcaaagttcaggtttgggtggtgagctgcgcgaccaagagtttgcgattattcttgat
acgttggccgaatgtcagggacgccgtaaagagatggcggagaagctaggtattagccca
cgcactttacgttacaaactcgccaaaatgcgtgatgcagggattgatatccccggttga
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