Vibrio cholerae O1 El Tor N16961: VC_2152
Help
Entry
VC_2152 CDS
T00034
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00300
Lysine biosynthesis
vch01100
Metabolic pathways
vch01120
Microbial metabolism in diverse environments
vch01230
Biosynthesis of amino acids
Module
vch_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VC_2152
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vch01002
]
VC_2152
Enzymes [BR:
vch01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
VC_2152
Peptidases and inhibitors [BR:
vch01002
]
Metallo peptidases
Family M20
VC_2152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AAF95297
UniProt:
Q9KQ52
Structure
PDB
PDBj
LinkDB
All DBs
Position
I:2303265..2304398
Genome browser
AA seq
377 aa
AA seq
DB search
MTDSPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGTQS
PLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEH
PDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIVGEPSSTLAVGDVVKNGRR
GSITGDLKVKGTQGHVAYPHLANNPVHKALPALAELAATQWDEGNAYFPPTSFQIPNLQA
GTGASNVIPGEFDVQFNFRFSTELTDEEIKRRVHSVLDAHGLDYDVKWTLSGQPFLTDTG
ELLAAVVAAVEEVNHQAPALLTTGGTSDGRFIAQMGAQVVELGPVNATIHKVNECVRIAD
LEKLTDMYQKTLNHLLG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagccctgtactggctctggcaaaagagctgattagccgccaatccgttact
cctgccgacgcaggatgtcaggatctgatgattgagcgcttaaaagcgctgggtttcgaa
attgaaagcatggtgtttgaagacaccaccaacttctgggctcgccgcggcacgcaatct
cccctgtttgtttttgcaggtcataccgatgtggtgcctgccggccctttgtcgcagtgg
cacactcctccttttgagccgactgtgattgatggtttcctgcatgggcgtggcgcagca
gatatgaaaggctcgctggcttgtatgattgtggcggtagagcgttttattgccgaacat
cccgatcatcaaggctcaatcggttttttgatcacttctgatgaagaaggcccctttatc
aacggtaccgtccgtgtcgtagaaacgctaatggcacgtaacgaactgatcgatatgtgt
atcgtcggtgagccgtccagtaccctagccgtaggcgatgtggtgaaaaatggccgtcgt
ggctccatcacgggggatttgaaggtaaaaggcactcaaggccatgttgcttatccgcat
ctggctaataatcccgtgcataaagcgctccccgcattggccgaactcgccgccacccaa
tgggatgaaggtaacgcctatttcccccccaccagctttcaaattcctaacctgcaagcg
ggtactggcgcatcgaatgtcatccccggtgaatttgatgtgcagtttaacttccgcttt
agtacagagctcaccgatgaagagatcaaacgccgcgtacattcggtcttggatgctcac
gggctcgattacgatgtgaaatggactctcagcggccaacccttcctgaccgatacgggc
gaactactggccgcagtagtcgcggcagtagaggaagtaaaccatcaagctcctgcgtta
ttgacgacaggcggaacatctgatggtcgcttcattgcccaaatgggcgcacaagtggtt
gagctcggtcccgtcaatgccaccattcacaaggtaaacgagtgtgtacgtattgcggat
ttagagaaattgaccgatatgtatcaaaaaaccttaaatcatcttttaggctaa
DBGET
integrated database retrieval system
