Vibrio cholerae O1 El Tor N16961: VC_2237
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Entry
VC_2237 CDS
T00034
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vch01011
]
VC_2237
Enzymes [BR:
vch01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
VC_2237
Peptidoglycan biosynthesis and degradation proteins [BR:
vch01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
VC_2237
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
LysM3_NFP
Peripla_BP_4
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AAF95381
UniProt:
Q9KPX5
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All DBs
Position
I:2390970..2392568
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AA seq
532 aa
AA seq
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MRVKFSWVLALLLVGCQSPQPVDTTTSDDQAVNPPTQSATVKKKRKPQTTATLPAGETES
VEEERVALTPQEQDDVWQRIAMQFKLGIPKDPSVDAQREWFLKNPGHLQAIASRAEPFLY
LITEKVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGR
RDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDL
PKETSGYVPKLIALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLTVK
ELQSFNPAYNQWATAPNGPHQLLIPVEKVERFNLAMEENRGKGIKVVRYKVKSGDTLSTI
ADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALSVSNRLAKTQSVPRGQYQ
LTHTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKLVIWKDSKPTSGVIRTVT
YKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQLKLYVDVTKFSA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttaaattcagttgggtattggcgttgctgctcgttggctgtcaatccccccaa
cctgtggatacgaccacatcagatgaccaagcggtaaacccgcccactcaatctgctacc
gtgaaaaaaaagcgtaagccgcaaacgactgcaactctgcctgctggcgaaacggagagt
gtagaagaagagcgcgtcgcgctgacaccacaagaacaagacgatgtatggcaacgcatt
gctatgcagttcaagctcggcatccccaaagacccaagtgttgatgcacaacgcgaatgg
tttctcaaaaacccaggtcacttacaagcgattgccagtcgtgctgaacctttcctctat
ctgatcactgaaaaagtcgagcaacgcggcctgccgctagaattggtgctgttaccgatt
gtcgaaagctcgttcgatccttttgcctattcccacggcagtgctgcaggcttatggcag
tttatttcgtctaccggcaagcgttatggtctcaaacaaaatttctggtatgacggccga
cgagatgtcgccgccgccacagacgctgcgctggattatcttactgtcttgaaccaacac
ttcgatggtgactggtatcacgccatcgccgcttacaacagtggtgaagggcgcgtggcc
cgcgccattaaagccaataaaaaagcgggtaaacctatcgatttcttctcgctggatctg
cctaaagagaccagcggttatgtccctaaactgattgcactagccgatgtgattgccaat
caggaaaaatacggtatctccatcccagcaatcgaaaaccgcccagtgttagccaccgtt
gacccgaaagagcagttggatcttgcgattgccgctcgatatgcaggtctaacggttaaa
gagctgcaaagctttaaccctgcctataaccaatgggcaacggctccaaatggcccacat
caactgctgatccccgttgaaaaagttgaacgttttaatctagccatggaagagaaccgc
ggcaaagggattaaggtggttcgctataaggtgaaatcgggtgatactctcagcaccatt
gccgataagtacaacaccacggctaaagtgatcaaagaagccaaccagattgccagcaac
caaattcgtgtgggtagctatctgttcgtaccaacctcggtgaaagatgagaaagcgtat
gcactgagcgtgagcaatcgcttagccaagacccaatccgtgccacgtggacagtatcag
ttgacgcacaccgtcaactcaggggaaagcctctggaccatcgccaagcagtataacgtg
ccttaccaatctctggcgaaatggaatggcatggcaccgaaagatgcgctgcgtaaaggt
cagaaattggtgatctggaaagacagtaaaccaacgagtggcgtgatccgcacggtaact
tacaaagtgcgctctggcgatacactgagtggtattgccaataagtttaaagtgaaaact
gctgacatcgttaagtggaatgatttaaacagcactcaatatctcaaggcgggtcagcaa
ctgaaactgtatgtggatgtgaccaaattcagcgcataa
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