Vibrio cholerae O1 El Tor N16961: VC_2343
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Entry
VC_2343 CDS
T00034
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vch03400
]
VC_2343
DNA repair and recombination proteins [BR:
vch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VC_2343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
Rad51
GvpD_P-loop
SLFN-g3_helicase
ABC_tran
AAA
AAA_16
AAA_22
RecA_N
AAA_29
AAA_14
AAA_24
Zn_ribbon_Thio2
NTPase_1
nSTAND_NTPase5
AAA_5
Viral_helicase1
Zeta_toxin
Zn_ribbon_8
nSTAND3
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AAF95486
UniProt:
Q9KPM4
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Position
I:complement(2497754..2499133)
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AA seq
459 aa
AA seq
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MIVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEA
KVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSG
QMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSI
LLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgattgtgaaagctaagcgcgcctatgtatgtaatgaatgtggagcggattttccgcgt
tggcaaggacagtgtaatgcctgtggttcgtggaattcgatttcagaagttcgtttagcg
gcttcaccgcaagtggcgcgcaatgaaaggttggtcggttatgcgggagcccttgaagcg
aaagtacaaactttggctgatattgatttacaagaagtgcctcgattcaccagtggcttt
aaagaactagatcgcgtactcggcggcggaattgtgccgggtgcggcgattttgattggt
ggtaatccgggcgcgggtaaatcgaccttactactgcaaaccatgtgtttactttccgga
caaatgccgacgttgtacgtgacgggcgaagaatcgttgcagcaggtcgcgatgcgtgct
tcacggcttggtttgccgaaacagcatctaaaaatgctctcagaaaccaatgtggatcgg
atttgccagattgctgagcaagaaaagccgcgcattatggtcatcgattcgatccaagtg
atgcatgtggcggatgtgcaatcgtcgccggggagtgtcgcgcaagtgcgtgaatcggcc
acggcgcttacgcgttatgccaaacaaaataatgtggcggtatttattgtgggccacgta
accaaagatggtacgttggcgggacctaaagttcttgaacacatcatcgattgctcgatt
ctgcttgatggtgatacagacagtcgttttcgtacacttcgtagtcataaaaaccgtttt
ggtgcggtcaatgaactcggtgtgtttgcgatgactggacaagggatgcgtgaggtgagt
aatccatcggcgattttcctttctcgtggagaagaagccacatctggtagctcagtgatg
gtggtgtgggaaggaactcgcccactcttagtcgagattcaagctttggtcgattactca
caactcgctaacccaagacgcgttgcggttggcttagaacaaaaccgtctctctttatta
ctggccgtgctgcataaacacggtggtttgcaaatggctgatcaggatgtgtttgtgaac
gtagtcggtggtgtgaaagtgacggagaccagtgcagatttagcgctactcatggcgtta
ttgtcgagttttcgtgatcgtccgctgccaaaagatgtcgtggtttttggtgaagtcgga
ttggctggagaaattcgtcccgtaccgagtggtcaagagcgccttaacgaagccttcaaa
catggttttaagaaagcgattgtgccgattgccaatatgccgaaaggtggtattgaaggt
atgcagatccacggtgtgaaaaagctttctgatgcgatcgcggcttttgatgagctgtaa
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