Vibrio cholerae O1 El Tor N16961: VC_2529 Help Entry VC_2529           CDS       T00034                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism vch  Vibrio cholerae O1 El Tor N16961 Pathway vch02020   Two-component system vch02040   Flagellar assembly vch05111   Biofilm formation - Vibrio cholerae Brite KEGG Orthology (KO) [BR:vch00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     VC_2529  09140 Cellular Processes   09145 Cellular community - prokaryotes    05111 Biofilm formation - Vibrio cholerae     VC_2529   09142 Cell motility    02040 Flagellar assembly     VC_2529  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:vch03021]     VC_2529 Transcription machinery [BR:vch03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      VC_2529 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID rve HTH_21 Motif Other DBs NCBI-ProteinID:  AAF95670 UniProt:  Q9KP49 LinkDB All DBs Position I:2711910..2713373 Genome browser AA seq 487 aa AA seqDB search MKPSLQLKLGQQLAMTPQLQQAIRLLQLSTLDLQQEIQEALESNPLLEVEENQDEAPSLD SVRMTEESPREPEELYEPEPQDSSDLIEKSEISAELEMDTTWDEVYSANTGSTGLALDDD APIYQGETTQTLQDYLHWQLDLTPFSDVDRTIAVALIDAIDDYGYLTVSLEEIQESLRSD DIELDEIEAVRKRIQQFDPFGVASLNLQDCLLLQLTTYPCDTPWLEEARLLLSQYIDDLG NRDYKTILKETKLKEEDLREILQLIQQLDPRPGSRIAQDHAEYVIPDVSVYKEQGRWLVT INPDSVPKLKINQQYADLMRGNNAESNYIRTNLQEAKWLIKSLESRNETLLKVAKCIVEH QHDFFEYGEEAMKPMVLNDVAMAVEMHESTISRVTTQKYMHTPRGIFELKYFFSSHVSTD NGGECSSTAIRALIKKLVAAENPAKPLSDSKIATLLADQGIQVARRTIAKYRESLGIAPS SQRKRLL NT seq 1464 nt NT seq  +upstreamnt  +downstreamnt atgaaaccgtcattacagctcaagctaggtcaacagttagccatgactccgcagctccag caggcgattcgtctgttgcagctttcgacgctggatctgcagcaagaaattcaggaagca ttggaatctaaccccttgttagaggtggaagagaaccaagacgaagcgccatcgcttgat agcgtacgtatgacggaagaaagcccgcgcgagccagaagaactctacgaacctgaaccg caggatagctcggatctgattgaaaaatcggaaatcagcgctgaattagagatggatacc acttgggatgaagtctacagcgccaatactggcagtacaggactggcactcgatgatgat gcccctatctaccaaggcgaaaccacccaaaccctgcaagattatcttcactggcaactc gacttaactccctttagcgatgtggatcgcactatagccgtcgcacttatcgatgctatc gacgattacggttatttaaccgtctcactagaggagatccaagagagcctgcgcagtgat gacattgagttggatgagattgaagcggtacgtaaacgcattcagcagtttgaccccttt ggtgtggcatcgcttaatctgcaagactgcttgttgctgcaactcaccacctatccctgt gatactccttggctggaagaagcgcgtttactgctctcacagtacatcgatgatttaggg aatcgcgattacaaaaccattctgaaagagactaagctcaaagaagaggacttgcgcgag atcctgcaactcatccaacagctcgatcctcgccccggcagtcgaattgcccaagatcac gctgaatacgtcatacctgacgtgtcagtctataaagaacaaggtcgatggctggtcacc atcaacccagatagtgtgcctaaactgaagatcaatcagcagtatgccgacctgatgcgc ggtaataatgcggagagcaactacatccgtaccaatttgcaagaggcaaaatggctgatc aaaagtttagaaagtagaaacgagacactgctcaaagttgccaagtgcatagttgaacac caacacgatttcttcgagtatggagaagaggcgatgaagccgatggtgctcaacgatgtg gcgatggcggtggaaatgcatgaatcgacaatttcgcgtgtcaccacgcagaaatacatg cataccccgcgcggcatttttgagttgaagtactttttctccagccacgtcagtactgac aatggcggagagtgctcgtccactgcgatcagggcgctgatcaaaaaactggtggcggca gagaatcctgccaaaccactcagtgacagcaagatcgcaaccctactcgctgaccaaggc atccaagtcgcgcggcgaaccatcgccaaataccgtgaatcacttggcatcgccccatca agtcagcgcaaacgcctgctatag

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