Vibrio cholerae O1 El Tor N16961: VC_2564
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Entry
VC_2564 CDS
T00034
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vch03009
]
VC_2564
Enzymes [BR:
vch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VC_2564
Ribosome biogenesis [BR:
vch03009
]
Prokaryotic type
rRNA helicases
VC_2564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
Helicase_C_2
PRAI
CMS1
AAA_22
DUF1529
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AAF95705
UniProt:
Q9KP15
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All DBs
Position
I:complement(2746119..2747501)
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AA seq
460 aa
AA seq
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MNANSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGL
GVLSNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQ
TLLFSATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLH
HQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVAT
DVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDE
YMDIAIEPSTLPQPAAGARPYAANMVTIQIDGGKKDKVRPGDILGALTSDGELTAEHIGK
INLFPMRAYVAVHKKIATKALNKIANGKMKGRQFRARLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgccaactcttttgctgctttgaatctgaagcctgaacttcttgctaaccttgaa
accatggggtttgccactatgactccgattcaggcgcaatctcttcctgcgatccttaaa
ggtcaggatgtgattggccaaggcaaaacaggctccggtaaaaccgctgcgtttggtctt
ggggtactctccaacctcaatgtgaagcgctttcgtgtacaagccttggtgctgtgtcca
acacgtgagttggccgatcaagtcgcgaccgatattcgtacgctagggcgtgctatccac
aatatcaaagtgttgacgctgtgtggcggcatgccgatggggccgcagatcggatccctt
gagcatggcgcgcatatcttggtcggaacgccgggacggattttggatcatttgagtaaa
gaccgtatcgatctcagtgagctcaataccttggtgttggatgaagcggatcgcatgctc
gaaatgggcttccaagaagcgctggaggcgatcattgctgctgcgccagccgagcgtcaa
accttgctgtttagtgcaacttaccccgctagtattgagcagattgcgcaaagcgtgact
cgcaatgcgctgatgattaaagttgaggcgacccacgatacttcaagcattcgtcaatac
ttctataaagtagaaggcagtgctgcgcgtgatgaggctctggaaacgttgcttttacac
catcaaccgacttcttcggtggtgttctgtaacactaaacgtgaagtacaaaatgttgcc
gatgccctgcatcaaagcggctttagcgtgattgaactgcatggtgatatggagcagcgt
gagcgtgaccaagccttagtgcaatttgccaataagagtatttctattctggtcgcgacc
gatgttgcggctcgtggtctggatgtcgataaccttgatgcagtgtttaactacgatctg
tctcgcgatcctgaagtgcatgtacatcgcatcgggcgtactggtcgtgcgggaagtaaa
ggcttagcgtttagcttctttagtgacaacgagagctaccgtgtggcgcaaattgatgag
tacatggatattgcgattgagccttcaaccttgccgcaacctgctgcaggcgctcgtcct
tacgcggcgaatatggtcaccattcagattgacggtggtaagaaagacaaggtgcgtccc
ggtgatattcttggcgcgctaaccagtgatggtgaactgactgcggagcatatcggcaag
attaacctgttcccgatgcgtgcttatgtagccgtgcacaagaaaatcgccaccaaagca
ctgaataaaattgccaacggtaagatgaagggacgccagttccgtgctcgcttactcaaa
taa
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