Vibrio cholerae O1 El Tor N16961: VC_2620
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Entry
VC_2620 CDS
T00034
Name
(GenBank) conserved hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vch03009
]
VC_2620
Enzymes [BR:
vch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
VC_2620
Ribosome biogenesis [BR:
vch03009
]
Prokaryotic type
ribosomal protein modification factors
VC_2620
BRITE hierarchy
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Ortholog
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Gene cluster
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Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AAF95761
UniProt:
Q9KNW0
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All DBs
Position
I:2788972..2790384
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AA seq
470 aa
AA seq
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MTVQTFTPNQTTTLETAKKTIAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEG
YEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHP
NVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCT
FCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPV
RHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMM
KRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFK
YSPVEGAAANEIEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGA
IGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSILHDAQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagttcagacttttacgccaaatcaaaccacgacactggaaacggcgaaaaaaacc
atcgccgagcaaagccaaaatagccaaaccacaggcaataaaattggctttgtttcctta
ggttgcccaaaaaacttagtggattcagaacgcattctgacccaactacgcactgagggg
tatgagatcgtcaacagctaccacgactccgatgtggtgatcgtcaacacctgtggtttt
atcgacagtgcggtgcaagagtctctggataccattggcgaagcgctgaaagagaacggc
aaagtgattgtgacgggctgcctcggcgcgcgtgaagatgaaattcgccaagtacacccc
aatgtgctcggtattacaggcccacacgcttaccaaaacgtattggagcacgtacaccaa
tacgcgccaaagccagcccacaacccgtttaccagcttagtgccggatcacggggtgaaa
ctgacgccaaagcattacgcttacctgaaaatttctgaaggttgtaaccaccgctgtact
ttctgcatcatcccttcaatgcgtggtgatttggtaagccgcccagtgggtgaaattatt
ggtgaagcggaacgcctgaaaaatgctggcgtgaaagagctgctcgtcatcagccaagac
accagtgcttacggtgtggataccaaacacagcctaggttttgccaacggctcaccggtg
cgccacaacatcaaagcgctcagtgaagagcttggcaaaatgggcatttgggttcgtctg
cactacgtttacccttacccacatgtggatgaaatcatcccattgatggcagaaggaaaa
gtgttgccttacttggatattccattccaacacgccagccctcgtgtgctgaaaatgatg
aagcgtccggggcaagcggagcgcactttagagcgcatcaaaaaatggcgtgaaatctgc
ccagaactggtgatccgctccacctttatcgtgggcttcccgggcgaaactgaagaggat
ttccaaatcctgctcgattggctgaaagaagcacaactcgatcgcgtgggctgctttaag
tattcgcccgttgaaggcgctgcagcgaacgagattgaagatcaaatcccagaagacgtg
aaacaagatcgtttcgagcgctttatgctcgtgcagcaagagatcagtgctgccaaactg
caaaaacgcatcggcagcaccatgcaagtgctgattgatgaagtcgatgaagaaggcgcg
attggccgtacttacgccgatgcaccggaaattgatggcttggtttacctcaatggtgaa
accaacctgaaaccgggtgagctggttaacgttgtgattgaacacgccgatgaatacgac
ctatggggcagcatactgcacgacgcgcagtaa
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