Vibrio cholerae O1 El Tor N16961: VC_A0058
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Entry
VC_A0058 CDS
T00034
Name
(GenBank) conserved hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VC_A0058
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vch01002
]
VC_A0058
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vch01011
]
VC_A0058
Peptidases and inhibitors [BR:
vch01002
]
Cysteine peptidases
Family C82
VC_A0058
Peptidoglycan biosynthesis and degradation proteins [BR:
vch01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VC_A0058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
AAF95972
UniProt:
Q9KNA7
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All DBs
Position
II:65520..66440
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AA seq
306 aa
AA seq
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MWWKVWVIGCALAVSWSINAAVFDLPIEGSSIVGNTQYHKVEKGETLADIAKKYDIGFLA
LMAANRGVDPFLPQEGFVISIPAKIILPKVAYEGIVINLAELRLYYFRPNEGKVHIFPVG
IGRIGRDTPVMQTSISSKRKYPTWTPPASIRKEYKAKGIDLPPVVPAGPENPLGDYAMRL
AYGSGEYLIHGTNKDFGVGMRVSAGCIRMDPKDIEWLYQQVERGEKVRIINEPIKVALEP
DRSVFIEVHEPLTRSNGVKKNLVVPEELSWWLQEHKISDAKARAAVLAQNGVPVEIAPPQ
WETIAQ
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggaaagtttgggtaatcggttgtgcattggcggtcagttggagtatcaatgcc
gccgtgtttgatctacctatcgaaggcagtagcatagtcggtaacacgcaatatcataaa
gttgagaaaggcgagactttagccgacattgcaaaaaaatacgatattggcttcctagca
ttaatggctgccaatcgtggagtcgaccctttcttaccccaagaaggttttgtcatctct
atccctgcaaagatcattttgccgaaagtggcctatgaaggcattgtgattaaccttgct
gagttacgcctttactatttccgtcctaatgaaggtaaagtgcatatcttccccgtcggc
attgggcgtatcggccgcgatacgcctgtgatgcaaacgtcaatcagcagcaagcgcaag
tacccaacttggacgccgccagcatcgattcgcaaagaatacaaagctaaagggattgat
ttgccgccagtcgtgcccgcaggcccagaaaacccgctcggtgattacgcgatgcgtttg
gcttatggttctggagaatatctgattcatggaaccaacaaagattttggcgtaggcatg
agggtgagtgctggttgcattcgtatggatccgaaagacattgagtggctttaccaacaa
gttgaacgtggagaaaaagttcggattatcaacgaaccgatcaaagttgcgcttgaacct
gatcgtagtgtgtttattgaagtgcatgagccgcttacccgcagcaatggcgtgaagaaa
aacttggtggtaccagaagagctgagttggtggctgcaagagcataaaatctctgatgca
aaagcgcgcgccgcagttttagcacaaaatggggttccggtcgaaattgctccaccacag
tgggaaactatcgcccagtaa
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