Vibrio cholerae O1 El Tor N16961: VC_A0116 Help Entry VC_A0116          CDS       T00034                                  Name (GenBank) clpB protein   KO K11907   type VI secretion system protein VasG Organism vch  Vibrio cholerae O1 El Tor N16961 Pathway vch03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vch00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     VC_A0116  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vch02044]     VC_A0116 Secretion system [BR:vch02044]  Type VI secretion system   Imp/Vas secretion system core components    VC_A0116 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_7 TniB AAA_22 AAA_25 ATPase_2 nSTAND3 AAA_14 Clp_N bpMoxR NBD_SMAX1 DUF815 ResIII Sigma54_activat NACHT Ras SRP54 Rad17 AAA_11 AAA_6 SLFN-g3_helicase AAA_33 Motif Other DBs NCBI-ProteinID:  AAF96030 UniProt:  Q9KN49 LinkDB All DBs Position II:126178..128787 Genome browser AA seq 869 aa AA seqDB search MIRIELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQA GLEVDQVKQAIASTYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAA LTRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLG RFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALR VVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHT LIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPT IDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIA INMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALT QSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHP QVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARA DLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGS PPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDC QNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARMEVIPYLPLGKEVLA QIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPVSL ALLNKLAERAPVERIRLAAEAGEFIGEVA NT seq 2610 nt NT seq  +upstreamnt  +downstreamnt gtgatccgtattgaattacccactcttattgcaaaactgaatgcacaaagcaaattggct ctggagcaagctgcctctctctgtattgagcgccaacaccctgaagtcactctagaatat tatctggatgtgttactggataatcccctctctgatgtgcgtctcgtactcaagcaagcg gggctggaagtcgatcaggtgaaacaggccatcgcatcaacctatagccgtgaacaggtc ttggatacctatccagcgttttcgccactgctggtcgagttactgcaagaagcttggctg ctttccagtaccgagttagagcaggctgagctgcgttcaggggcgattttcttagccgcg ctgacccgtgcggaccgttatctgtcattcaaattgatcagtttgtttgaaggcatcaac cgcgaaaacctcaaaaaacactttgcgatgatcttaagtgattctgcagaaaccgcagtg gctaaaacagacaaaaatgcggccaatccactgcaagccgccgcagaaacaccactcgga cgcttttgcacgaatgtgactgagcaagcccgtaacggtgagcttgatcctgtcctgagc cgtgaaaatgaactcaacttgatggtggatattctgtgccgtcgccgcaaaaacaacccg attgtggtgggtgaagcaggtgttggtaaaagtgccatgattgaaggtttggcgctgcgt gtggtggctggcaaagtgcccacccaactgcaaaatgtagaactctattcgttggatctt ggtcgcttgcaagcgggtgcatcggtgaaaggcgagttcgaaaagcgcctaaaaggggtg attgatgcgattaagcaatcgcctaaaccgatcattttattcatcgatgaagcgcacacc ttaattggttctggtaaccaagaagggggcagtgatgcggcaaacttgctcaagcctgcg ctggcgcgtggtgagttaagcacagtggcggcgacgacgtggaaagagtacaaaaagtat tttgaaaaagatcccgcgctgacgcgccgtttccaactggtcaaactcgatgaaccaacg atcgatcaagccgtcgatattctgcgcggtcttaacagtgtctatgaaaaggcacacaac gtactgatcactgatgatgcactaaaagctgccgctgaactgtcagcgcgttacatctca ggtcgtcaactgcccgataaagcgattgatgtgctggataccgcttgtgcgcggattgcg atcaatatgaccacgccacctaagcgtttagcgctacttgaaaccttgtgccatcagcgt caactcgaaattgacatgctagagcgggcgcaattccttggccaagaggtcgatagcgag cgcctcgatgttttgcgtaatcaagagttggccgatgaagcggaaaaagccgcgttgaca cagagttggcagcagcaaaaaagcttggtggagtcgatcatcgcactgcgtgctgagctg atggagttaagccaagcgcaagagcaagatcccgaccatttattggtggtgcgtacggcg ctgcaagagcagtatcaagcactcgatgcgattgatcatgctgagcgcttgatgcacccg caagtcgatgcggatcagattgctgaagtgatcgccgattggacgggcgtgcctgttgat cagatgaacaccgatgagctgcataaaatcacccatttgacctcgattttaggccaagcg atcaaaggccaagaaacggccatcgaacgtatccatcgtcacttactgacagcgcgtgcc gatctgcgtcgtccgggacgtccgaaaggggcattcctgctggtggggccaagcggtgta ggtaaaaccgaaacggtagtgcaactggcagagcagctttacggtggtaaacagttcctc accaccatcaacatgtcggaataccaagagaaacacaccgtttcccgcctgattggttca cctccgggttatgttggctacggtgaaggcggtgtgctgacggaggctatccgtaagatg ccttattcggtggttctgcttgatgaagtcgaaaaagcccatccagaagttttaaatatc ttctaccaaggctttgataaaggcgaaatcgccgatggtgaaggtcgtgtcatcgactgc caaaacatcgtgttcttcctgacatcgaacttaggctaccaaaccatagtcgattatgcc gatgagcccgccaagcttgatgaagcgctttatcctgaattggccgctttctttaaacct gctctgctggcgcgtatggaagtgatcccttacctaccactgggtaaagaagtgttggca cagattgttcgcggcaagctggctcgtctcgagaaactgttcaagacacgttacaacgca gaagtggtgattgaagagagcttaattgacgaaatcttaagccgtgcgacacgcagcgaa aacggtgcgcgtatgctggaggcgatcattgaagggcaattgctgccgcccgtttcattg gcgctgctgaataaactcgccgagagagcgcccgttgagcgcattcgtttagcggcagaa gcgggtgaatttatcggagaggtagcgtaa

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