Vibrio cholerae O1 El Tor N16961: VC_A0120 Help Entry VC_A0120          CDS       T00034                                  Name (GenBank) IcmF-related protein   KO K11891   type VI secretion system protein ImpL Organism vch  Vibrio cholerae O1 El Tor N16961 Pathway vch03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vch00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     VC_A0120  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vch02044]     VC_A0120 Secretion system [BR:vch02044]  Type VI secretion system   Imp/Vas secretion system core components    VC_A0120 SSDB OrthologParalogGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical Helical_needle MMR_HSR1 Motif Other DBs NCBI-ProteinID:  AAF96034 UniProt:  Q9KN45 LinkDB All DBs Position II:132470..136015 Genome browser AA seq 1181 aa AA seqDB search MWKFIVGIVRRLKPTVVAALPILLFTTFILLNVAIWWAGPWLEVAGYKPLESIMARVVAS SLFTLGCLAVWGIWQWRKLQAFKSEQKREEQLRQDPIKVYEQRQEVELNQVMLNMKQSLN KHNYLYALPWYLVLGLENAGKTSLINRSGQNFVFSSVMRASGQKSENPYSFDWWIGDESV LIDPDGELLTQGNRSEENDGALERRLWLHFVDWLDRTRSRRPLNGIVLALDVAHLATATA SERKAYANLLRARLRELMETLSTRLPVYIALTKLDLLHGFEPFFKHYTKSQREEVLGFTF SMDSVDNLDSWLEEFASEYTQFVSRVNGMLPHAVAAPMTLEERNAIYSFTRQISGLKEIL QQFFQEALASDQFSTSALVRGAYFTSVYQQGVPTNAFDDAASRRYGLSHAINTAQRAKNS TVYFTQKLFTHIIYPEAGLASDNFRVAKNKRRLMGLSFVACSVATLLLAGTWHRNYLNNV QHADTVLTKVNQYKEQFPTSRSLASQREVLDPLNKIREATLEFGFFRDKPQYISDFGLYQ GHTIGPKVEETYLNLLETRFLPLLMADTIVALNQAETDEEKLAVLRVYRMLVDKSGRYQD YVMDYFAKYWQKSFSGQRQIQEELLGHLDYAMRHTDLTAERLNGDKGAEQVMRPYDKVIA RAQVELGSMPNDQRVYRNLKLSAQTVLGPSVNLRSLIGPVFDVVFEERVLNSSSLFIPQM LTKRGFDDYFMPQSESVSELALIDSWVLGQSKTAQFSEADKQALREKIRDLYVADYTNTW RAALNEIDVKYFNDINDAVMVLENITSNLEPMQRLLRTLDDNTQLYSALPKDESALKELL KSPKYKVASMIETPFADLNGMLKPVGSKPAYMTEVLASVDELKSYLKSIQDAPDVGMAAL DATKARVKLVNADPIYTLKRISSGLPKPLDSMMAKLADESWYVVKQEAIKHLEVRWTEDV YKTFQSKLAGRYPFNPASNKDVALADFEAFFAPNGTLDNFYNQQLKMFIDENISVASDDS AQSIIRKEVLDQIKQAQKIREAFFNRKGILDVSFSVEPLSLSNNKRRSVLNVDGQFLAYS HGPRENVELIWPNTLRDSAVSKVTLIPTQTNMSPRSLQIQGPWAFFRLLDQGDVVSASQT SVDFKFIVDGGEMIYRINAEADANPFTERLFKSFKLSKTLY NT seq 3546 nt NT seq  +upstreamnt  +downstreamnt atgtggaaattcattgttggaatagtaaggcggcttaaacccacggtggtggcagcactt cccattttgctattcactacgttcattttgctgaacgttgccatttggtgggcaggccct tggttagaagtggctggctataaaccgctggagtcgatcatggctcgagttgtggcaagc agtctgtttactctcggctgtttagccgtgtggggcatttggcagtggcgtaagttgcaa gccttcaaatcggagcaaaagcgcgaagagcaactgcgccaagatccgatcaaggtgtat gagcagcgccaagaggttgaactgaatcaggtgatgctcaatatgaagcagagcctaaat aaacacaactacttgtatgcactaccttggtatttggttctaggtttagaaaatgcgggt aaaaccagcctgatcaaccgttctggtcagaactttgtcttctcttcggtcatgcgagct tcgggacaaaaaagcgaaaacccatactcgtttgattggtggattggtgatgaatctgtc ctgattgatcctgatggtgagctgttaacgcaaggcaatcgtagtgaagaaaatgatggt gcgttagagcgccgcttatggttgcattttgtcgattggctagaccgcactcgtagccgc cgcccgttaaacggcatcgtgttggcgttggatgtggcgcatcttgctaccgccaccgcc tcagagcgtaaagcttatgccaatttgctgcgtgctcgtctgcgtgagttgatggaaacc ttatcgactcgtctgccggtgtacattgcactgactaagctcgacttactgcacggtttt gagcctttctttaagcactacaccaaaagtcagcgcgaagaggtgttgggttttaccttc tcaatggattcggtagataacctagattcatggttggaagagtttgccagtgagtacact caatttgtgtcacgagttaatggcatgctgccgcatgcggtcgcagcgccaatgacgctt gaagaacgtaacgcgatttacagcttcacgcgtcaaatctcaggtttgaaagagattttg caacagtttttccaagaggctttggcgagcgatcaattctcaacgtcagcgctggtgcgt ggtgcctatttcacgtcggtttaccaacaaggtgtacctaccaacgcttttgatgatgcg gcttcccgtcgttatggtctgtctcatgcgattaatacggcgcagcgcgcgaaaaactcc acggtctatttcacgcaaaaactgtttacccacatcatttatcctgaagcgggtttagcg tcggataatttccgggttgcaaaaaacaaacgccgtttgatggggctctcttttgtcgca tgctcagtggcgactttgctgttggcgggaacttggcatcgtaactacctcaataacgtg caacacgccgatactgtattaaccaaagtgaatcagtataaagagcagttcccgaccagc cgttcattggcctcacaaagagaggtattggatccgttgaacaagatccgtgaggcgaca ctggagtttggtttcttccgtgataaacctcagtacatctccgattttggtctctaccaa gggcacaccattggcccgaaagtagaagagacctacttaaacttactcgaaactcgcttc ttgcctctgttgatggcggacaccattgttgcgctcaatcaagctgagacagatgaagaa aaattagcggtgctgcgtgtgtatcgcatgctggtcgataaaagtggtcgttaccaagac tatgtgatggattattttgcgaagtattggcaaaaatccttctcaggtcagcgtcaaatt caggaagagctgctcggccacttagattacgcgatgcgtcatacggacctcactgcagag aggctcaatggtgataaaggggcggagcaggtgatgcgcccttacgataaagtgattgct cgtgctcaggttgaactgggttcaatgccaaacgaccagcgcgtctatcgtaacttgaaa ttgagcgcacaaacggtgcttggtccttcggttaacttgcgtagcttgattgggccggtg ttcgatgtggtgtttgaagagcgcgttcttaacagtagcagcctgtttattcctcaaatg ctcaccaagcgtggttttgatgactactttatgccgcaatctgaatcggtctctgagctg gcactgattgacagttgggttctgggacagagcaaaacggcacagtttagtgaagcagac aagcaggcactgcgcgaaaaaatccgcgatctttatgtggcggattacaccaacacatgg cgcgcggcactcaatgaaattgatgtgaagtatttcaatgacatcaatgatgcggtcatg gttttggaaaatatcaccagtaaccttgagccgatgcagcgtctactgcgcacattagat gacaacacccaactgtacagtgcgttacctaaagatgaatcggcgttaaaagagctgctg aaaagtccgaaatacaaagtggcttcgatgattgaaactccgtttgctgatctgaacggt atgctcaaaccggtgggcagcaaaccagcgtacatgacggaagtcttggcttcggtggat gagctgaaaagctacttgaaatcgattcaagatgctcccgatgtcggtatggcggcgctc gatgcgaccaaagcgcgggtcaaactggttaatgctgaccctatctataccttaaaacgt atctcgtcaggactgccgaagccgctggatagcatgatggcaaagcttgcagatgagagc tggtatgtggtcaagcaagaagcgatcaagcatctggaagttcgctggacggaggatgtg tataaaaccttccaaagcaagctggctgggcgttatccattcaaccccgcatcaaataaa gatgttgccttggccgattttgaagccttctttgcgccgaatggcacgttagacaacttc tacaatcagcaactgaagatgtttattgatgagaacatcagcgtcgcgtcggatgactca gcgcagtcgatcattcgtaaagaagtgctggatcagatcaagcaagcgcagaaaattcgt gaggctttcttcaaccgtaaagggattttggatgtcagcttctcggttgagccgctcagt ttgagtaacaacaagcgtcgtagtgtgctgaatgtggatggtcagttcttagcttacagc catggtccgcgtgaaaatgtggagctgatttggcctaacacgctgcgtgattctgcggtg tctaaggtgaccttgattccaacccaaaccaatatgtcaccgcgcagtttgcaaatccaa ggaccgtgggcattcttccgcttattggatcaaggtgatgtggtttcggcgagtcaaacg tcggttgatttcaaatttatcgtcgatggcggtgagatgatctaccgtattaacgcagag gccgatgccaacccatttaccgaacgcctgttcaagtcgttcaaactgtctaaaacactc tattaa

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