Vibrio cholerae O1 El Tor N16961: VC_A0182
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Entry
VC_A0182 CDS
T00034
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
vch
Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vch03000
]
VC_A0182
Transcription factors [BR:
vch03000
]
Prokaryotic type
Helix-turn-helix
Other families
VC_A0182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
AAA_5
Mg_chelatase
GAF_2
AAA
HTH_8
AAA_2
AAA_16
AAA_22
MCM
GAF_3
AAA_14
IstB_IS21
Fn3_SaeA_5th
Motif
Other DBs
NCBI-ProteinID:
AAF96095
UniProt:
Q9KMY4
LinkDB
All DBs
Position
II:complement(200338..201930)
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AA seq
530 aa
AA seq
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MQEFSLSTLLEMTVGLASGANNEERFHRLLDAVRKAVICDCVVLMSLHNDTLTPLAMQGL
TRDTLGRRFVVSEHPRLAQICSADLPVRFAADCPLPDPFDGLLLDSEDDLPMHSCMGLPL
HFGEQLLGILTLDSLKPDAFDHLSPRSLEILAAIAAATLKMTLTFSELENQAKQTQLRLE
ELNQEAWSRDSVEIIGNSGPMLAMKADIDVVAPSQFNILIHGETGVGKELVARTIHQRSN
RKRQPLVYVNCAAIPENLLESELFGHVKGAFTGADRARMGKFALADGGTLFLDEIGELPL
SAQSKILRALQNHEIQPVGQDRVQTVDVRILAATNRDLKKEVEAGRFRADLYHRLSVYPI
YVPPLRERKGDLSLLAGYFVEQARRKLGITQLKLHGDVLSQLIQYPWPGNVRELEHVINR
AALKAKARQRGRPVTTLKVEDLGELQGPRAAMVEPTAQDEPMLGEWIGELGLRDATDEFQ
RHLISETLTQADFNWAEAARRLQTDRANLTRLAKRLGITVSRSHSIERSR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaattctccttgagtactttgttagaaatgactgtcgggctcgccagcggagcc
aacaacgaagagcgttttcatcgcctattggatgcggtacgcaaagcggtgatctgtgac
tgcgtcgttctgatgtctctgcacaacgacaccttaactcctctggcgatgcagggatta
actcgcgacaccctaggccgccgtttcgtagtcagtgaacatcctagattggctcaaatt
tgcagcgcggatttacccgtccgttttgcggcggattgcccactccccgacccttttgat
gggctgctactcgacagcgaagacgatctgcctatgcactcatgtatgggcttacccctc
cattttggcgagcaattactgggtatattgacgctcgatagcttaaagcccgatgcgttt
gatcatctctcacctcgtagtttagaaatacttgcggccattgcggcagcaacgttgaaa
atgacgctcaccttttctgagctggaaaaccaagccaaacagacacaattacggctggaa
gagctcaaccaagaagcatggagccgtgacagtgtcgaaattattggtaatagcggcccc
atgctcgccatgaaagcggatattgatgtggttgcgccctcgcaattcaatattctgatc
cacggtgaaaccggtgtaggtaaggagctggttgctcgtaccatacaccagcgctcaaat
cgcaaacggcagcctctggtctatgtcaactgcgccgctatccctgaaaacctgctggaa
agcgaactgtttggccatgttaaaggggcgtttaccggagctgaccgcgcgcgaatgggt
aagtttgctctggcggatggcggcacactgtttctcgatgagataggtgaattacccctt
agtgcgcaaagcaaaattctgcgcgcactgcaaaaccatgaaattcaacctgttggccaa
gatcgagtacaaaccgtcgatgtgcggattctagcagccaccaaccgtgatttgaaaaaa
gaggtcgaagctggccgttttcgagccgatctctatcacagattgagcgtgtatccgatc
tacgtgccgccactgcgtgaacgcaaaggcgatctctccctactcgcgggatacttcgta
gaacaagcgcgacgtaaactcggtatcactcaactaaagctgcatggcgatgtgttaagt
cagcttatccaatacccttggccggggaatgtgcgagagctagagcatgtgattaaccgc
gcggcactcaaagccaaagcacgccagcgggggcgcccagtcacgacattaaaagttgaa
gacttaggggaattacaagggccaagagcagcgatggttgaaccgacagcgcaagatgaa
cctatgctgggtgaatggattggtgagttgggtttacgtgacgcgacggatgaatttcaa
cgccatttgatcagcgaaaccctcacccaagctgactttaattgggcagaggcggcacgc
cgcctccagaccgacagagccaacctgacacggctggccaaacggctcggcattactgta
tcccgcagccactcaatagaaaggtctcgttaa
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