KEGG   Vibrio cholerae O1 El Tor N16961: VC_A0520
Entry
VC_A0520          CDS       T00034                                 
Name
(GenBank) exonuclease SbcD, putative
  KO
K03547  DNA repair protein SbcD/Mre11
Organism
vch  Vibrio cholerae O1 El Tor N16961
Brite
KEGG Orthology (KO) [BR:vch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vch03400]
    VC_A0520
DNA repair and recombination proteins [BR:vch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VC_A0520
    Archaeal homologous recombinant proteins
     VC_A0520
SSDB
Motif
Pfam: Metallophos SbcD_C Metallophos_2 FBPase_2
Other DBs
NCBI-ProteinID: AAF96423
UniProt: Q9KM68
LinkDB
Position
II:450455..451594
AA seq 379 aa
MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI
DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS
PQAGEVAFWGMPYHDPELVRHYYHNDITTHDAAHQFLCESILAQRNPSQRHVLISHCFVD
GAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQMKGAEHIRYSGSLMKYSFGEQ
HQNKGATLVELGQQGFISATHIPLIAPHQMRIIEGELEAILAAGATDPQADDYLLVRLLD
KHAILDPMEKLRQVYPNVLHLEKPGMLIGVDQEMGKARLARGELDMFRDFFLEAKREPLS
EQQEKVVIEVIARLKAEGI
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgaagtttctacatacttcggattggcatcttggtcgccaatttcatcaagtctcatta
ttagatgatcaaagcgctgttctcgcacaactgatcgactttctgcgcgacaatccggtg
gatgccgtgattgtcgccggtgatatttatgatcggtcgattccacccacggcggcgatt
gatttattggatgaagtggtcagcgtgatctgtggcgagttgaagacacctttattgatg
atcccgggcaatcacgatggtgcgaagcgtttaggctttgccgcgaagcagatgaaaaat
tcgggcttacatatctttgctgattttgaacagatgatgcagccacttgtgctgcattca
ccgcaagcgggcgaggtcgctttctggggaatgccgtatcacgaccctgagttagtgcgc
cactactatcacaacgacatcaccacgcatgacgctgcacaccaatttttgtgcgagagt
attcttgctcagcgcaatccgtcacaacgtcacgtattaatcagccactgttttgtcgat
ggcgcgatggagtctgaatctgagcggccattatcgattggtggatcagatcgtgttgac
catcgccattttttgccttttgactacgtcgcgcttgggcatttacaccagccgcaaatg
aaaggcgcggaacacattcgctactctggctcattgatgaaatacagcttcggtgagcag
caccaaaacaaaggcgctaccttggtagagctgggtcagcaaggttttattagcgcaacg
catattcctctcatcgcgcctcatcaaatgcgcattatcgagggagagttggaggcgatt
cttgcagcgggagccaccgacccgcaggcagacgattacctgctagtgcgtcttttggat
aagcatgccattctcgacccgatggaaaagctgcgtcaggtttatccgaatgtgctgcat
cttgaaaagccgggcatgttgattggtgtggatcaagagatgggcaaggcacgattggcg
cgaggggaattggatatgtttcgtgattttttccttgaggcgaaacgtgaacctctgagt
gagcagcaagagaaagtggtgattgaggtgattgcgcgcctgaaagcggagggcatttaa

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