Entry |
|
Name |
(GenBank) exonuclease SbcD, putative
|
KO |
K03547 | DNA repair protein SbcD/Mre11 |
|
Organism |
vch Vibrio cholerae O1 El Tor N16961
|
Brite |
KEGG Orthology (KO) [BR:vch00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:vch03400]
VC_A0520
DNA repair and recombination proteins [BR:vch03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VC_A0520
Archaeal homologous recombinant proteins
VC_A0520
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
II:450455..451594
|
AA seq |
379 aa
MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI
DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS
PQAGEVAFWGMPYHDPELVRHYYHNDITTHDAAHQFLCESILAQRNPSQRHVLISHCFVD
GAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQMKGAEHIRYSGSLMKYSFGEQ
HQNKGATLVELGQQGFISATHIPLIAPHQMRIIEGELEAILAAGATDPQADDYLLVRLLD
KHAILDPMEKLRQVYPNVLHLEKPGMLIGVDQEMGKARLARGELDMFRDFFLEAKREPLS
EQQEKVVIEVIARLKAEGI |
NT seq |
1140 nt +upstreamnt +downstreamnt
atgaagtttctacatacttcggattggcatcttggtcgccaatttcatcaagtctcatta
ttagatgatcaaagcgctgttctcgcacaactgatcgactttctgcgcgacaatccggtg
gatgccgtgattgtcgccggtgatatttatgatcggtcgattccacccacggcggcgatt
gatttattggatgaagtggtcagcgtgatctgtggcgagttgaagacacctttattgatg
atcccgggcaatcacgatggtgcgaagcgtttaggctttgccgcgaagcagatgaaaaat
tcgggcttacatatctttgctgattttgaacagatgatgcagccacttgtgctgcattca
ccgcaagcgggcgaggtcgctttctggggaatgccgtatcacgaccctgagttagtgcgc
cactactatcacaacgacatcaccacgcatgacgctgcacaccaatttttgtgcgagagt
attcttgctcagcgcaatccgtcacaacgtcacgtattaatcagccactgttttgtcgat
ggcgcgatggagtctgaatctgagcggccattatcgattggtggatcagatcgtgttgac
catcgccattttttgccttttgactacgtcgcgcttgggcatttacaccagccgcaaatg
aaaggcgcggaacacattcgctactctggctcattgatgaaatacagcttcggtgagcag
caccaaaacaaaggcgctaccttggtagagctgggtcagcaaggttttattagcgcaacg
catattcctctcatcgcgcctcatcaaatgcgcattatcgagggagagttggaggcgatt
cttgcagcgggagccaccgacccgcaggcagacgattacctgctagtgcgtcttttggat
aagcatgccattctcgacccgatggaaaagctgcgtcaggtttatccgaatgtgctgcat
cttgaaaagccgggcatgttgattggtgtggatcaagagatgggcaaggcacgattggcg
cgaggggaattggatatgtttcgtgattttttccttgaggcgaaacgtgaacctctgagt
gagcagcaagagaaagtggtgattgaggtgattgcgcgcctgaaagcggagggcatttaa |