Vibrio cholerae O1 El Tor N16961: VC_A0523
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Entry
VC_A0523 CDS
T00034
Name
(GenBank) aminotransferase, class II
KO
K10915
CAI-1 autoinducer synthase [EC:2.3.-.-]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch02024
Quorum sensing
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VC_A0523
05111 Biofilm formation - Vibrio cholerae
VC_A0523
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_3
Aminotran_5
DegT_DnrJ_EryC1
Herpes_gp350_A
Motif
Other DBs
NCBI-ProteinID:
AAF96426
UniProt:
Q9KM65
Structure
PDB
PDBj
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Position
II:complement(457023..458192)
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AA seq
389 aa
AA seq
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MNKPQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQSNDYLALANHPLIKA
RLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTIC
QPNTNVYIDFFAHMSLWEGARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLG
TIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAY
RAGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKL
RIGLSQLGLTIRSESQIIGLETGDERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLS
LNSDVNDEQIAKIIEVCSDAVNYGDFYFR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcctcaacttcctgattttattcagaacaagatagatcactatattgaaaat
tattttgatataaacaaaaacggtaaacaccttgtattgggtaaacaagccagccctgat
gacattattttgcaaagtaatgattatctcgcattggccaatcatccgttgatcaaagct
cgtttggcgaagtcattactggaagaacaacaaagcttatttatgtcagcctcatttcta
caaaatgactatgacaaacccatgattgagaaacgtctggctaagttcacaggctttgat
gaatgtctattatctcaatctggttggaatgcaaacgtcggtttattacaaaccatctgc
cagcccaatacgaatgtttacattgattttttcgcgcacatgtcgttatgggaaggggcg
cgctacgccaatgctcaggcgcatccttttatgcataataactgtgaccatttacgtatg
ctgattcaacgtcatggtcctgggatcattgtcgtagactcgatttacagcactttaggt
acgattgcaccgctagcggaactggtcaatatcagtaaagagtttggctgcgccttatta
gtcgatgaatcccactctttgggcacacatggccctaatggtgcaggtttattggcagaa
ttaggcctcactcgtgaagtgcattttatgaccgcaagtttggccaaaacctttgcttat
cgcgcaggagccatttggtgtaacaatgaagtgaatcgctgcgttccttttattagttat
ccagctatttttagttctactttgctgccttatgaagcggcaggattagaaacgacttta
gagattattgaatctgcggataatcgtcgtcagcatttagatcgtatggcaagaaaatta
cgcataggattatcccagctgggattaaccattcgcagtgaaagccaaattattggtcta
gaaacaggagatgaacgaaataccgaaaaagttcgggattatttagaaagtaatggagtg
tttggctcagtattctgccgcccggcaacttcaaagaataaaaacattattcgcttatca
ctcaatagtgatgtgaacgatgagcaaatcgccaaaataattgaggtttgctctgatgcg
gtcaactacggtgatttttattttcgttaa
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