Vibrio cholerae O1 El Tor N16961: VC_A0785
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Entry
VC_A0785 CDS
T00034
Name
(GenBank) GGDEF family protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_A0785
Enzymes [BR:
vch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VC_A0785
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AAF96683
UniProt:
Q9KLF9
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All DBs
Position
II:728957..730840
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AA seq
627 aa
AA seq
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MAPILSHSIPIPSSMQANWQQMLNLLAEVLKVSATLIMRLRHHDLDVFCTSVGSDNPYQV
GMTERLGTGLYCETVVNTRQILLVSNADLDPLWKDNPDLELGMRAYCGVPLQWPNGELFG
SLCVTDRQARQFLSTDQQLIKTFAESIEAQLKTLYQRETLLQMNQDLHFKVRHKMQSIAS
LNQSLHQEIDKRRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEELAVIHIG
FANARQLQARLGYHLWDDVLKQLRERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQ
LCHRLIHAGQAQFVTEGLPVHLNPYIGVALSRETRDPQQLLRHAVSSMLACKDSGYKVFF
HSPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPVLGEF
SNETLIHMAEQNGLIFEVGHFVLHQALKAASDWLAVCPTFCIAINVSSVQLKNSGFVEQI
RDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASFQYLK
KFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFILEQGC
DVGQGFLYGKPMPSEVFTLKLESHALA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgatcctttcacactcgatcccgatcccttctagcatgcaggcaaattggcag
cagatgctcaacctgctggccgaagtgctgaaagtctcagccaccctgatcatgcgttta
cgccatcacgatcttgatgtgttttgtaccagtgtcggcagtgacaatccataccaagtc
ggcatgaccgaacgattaggcacaggcttgtattgtgaaactgtggtcaatactcgccag
atattgttagtcagtaacgccgacctcgacccattgtggaaggataacccagatctggaa
ttgggcatgcgcgcttactgtggcgtaccattgcaatggccaaacggtgagctttttgga
tctttgtgtgtcaccgatcgtcaagctcgccagtttcttagtaccgatcagcaattgata
aaaacctttgctgaatcgattgaagctcagcttaaaaccctttaccaacgcgaaacgttg
ttgcaaatgaaccaagatttgcacttcaaagttcgtcataaaatgcaaagcatcgcctcg
ctgaaccaatctctccatcaagagatcgataaacgccgtgccgcagaacagcagattgag
tatcagcgcagtcacgaccttgggactggctttctgaatcgcacggcattggagcagcag
ctcgcgatgcagctggctcaattggcggaacacgaagagctcgctgtgattcatatcggt
tttgccaatgcccgccaattacaggcgcggctgggttaccacctttgggatgatgtgcta
aagcagttacgtgagcgacttggtccggtgacggagggggaattactgaccgctcgccct
aactcgaccaatttgacgctgatcttaaaagcccatccgctcgacacccaattaaatcag
ctttgccatcgtttaattcacgctgggcaagcgcaatttgtgacggaggggctgcccgtt
cacctcaacccttatattggtgtggcccttagccgtgaaacacgcgatccgcagcagcta
ctgcgccatgccgtcagcagcatgttggcgtgtaaggactcgggatacaaagtgtttttt
cactctcccgcattagccgataaccatgcacggcaaaatcaattggaaaactatttactg
caagcggtgcgcaacaacgatctgctgctctacttccaacctaaagtcagcatgaaaacc
cagcgctgggtcggtgctgaggcattgttgcgttggaagcatccggtgttgggtgaattt
tccaatgaaaccttgattcatatggcagagcaaaatggtcttatctttgaagtggggcat
tttgttttgcaccaagctttaaaagccgccagtgattggttagcggtgtgcccaaccttt
tgtatcgcgatcaatgtctcttccgtacagctcaaaaacagtggctttgtcgagcagatt
cgagatctgctggcgctgtattgcttccctgcgcatcagttggaactggaaatcaccgaa
agtggcctgatcgtcgatgagccgaccgcgagtgatattctcaaccgactacacacatta
ggcgtgacattatcactcgatgattttggtacgggttacgcttcgtttcagtatctaaaa
aaattcccatttgatggcatcaagattgataaaagttttatggagcagatcgaacacagc
gaaagcgatcaagaaatcgtgcgttctatgctgcatgtagcgaaaaaactgaacttaaac
gtggtggtggaaggtattgagtcgacgcagcaagagcagttcattctggaacagggttgc
gatgtcggccaaggctttttatatggcaaacctatgcccagtgaagtgtttaccctcaag
ctcgaaagccacgctctggcgtaa
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