Vibrio cholerae O1 El Tor N16961: VC_A0820
Help
Entry
VC_A0820 CDS
T00034
Name
(GenBank) chaperonin, 60 Kd subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VC_A0820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vch03019
]
VC_A0820
03110 Chaperones and folding catalysts [BR:
vch03110
]
VC_A0820
03029 Mitochondrial biogenesis [BR:
vch03029
]
VC_A0820
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vch04147
]
VC_A0820
Enzymes [BR:
vch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VC_A0820
Messenger RNA biogenesis [BR:
vch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VC_A0820
Chaperones and folding catalysts [BR:
vch03110
]
Heat shock proteins
HSP60 / Chaperonin
VC_A0820
Mitochondrial biogenesis [BR:
vch03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VC_A0820
Exosome [BR:
vch04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VC_A0820
Exosomal proteins of other body fluids (saliva and urine)
VC_A0820
Exosomal proteins of breast cancer cells
VC_A0820
Exosomal proteins of colorectal cancer cells
VC_A0820
Exosomal proteins of bladder cancer cells
VC_A0820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
AAF96718
UniProt:
Q9KLC6
LinkDB
All DBs
Position
II:766141..767733
Genome browser
AA seq
530 aa
AA seq
DB search
MAAKHVLFSTDARQKMLSGVNLLANAVKVTLGPKGRHVVLNKSYGAPTITKDGVSVAKEI
ELADKFENMGAQMLKQVASKANDEAGDGTTTATVLAQALINEGMKAVAAGMNPMDLKRGI
DKAVSAAVEKLHQLAKPCSDTQSITQVGAISANSDHAIGEIIAQAMEKVGRNGVITVEEG
QALQNELSVVEGMQFDRGYLSPYFINQPKAGCVELENPYVLLVDKKISHIRELLPILESV
AKASRSLLIIAEDVDGDALATLVVNSMRGIIKVAAVKAPGFGEQRKAMLEDIAALTAGRV
ISEEIGLELEKVTLDDLGSAKKVTINKDNTTIVDGAAEPSALQDRIAQIQHQLEHTTSQY
DRDKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
KIANELSNLQGDNDDQNVGIRIALRAMEEPLRQIAINAGDEASVIANQVKTGDEHYGYNA
ATGQFGNMLEMGILDPAKVTRSALQFAASIAGLMITTEAMVSEVDKESAA
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaacacgttctgttttcaaccgacgccagacagaaaatgcttagtggcgta
aatttactggccaacgccgtcaaagttacgctcgggcccaaaggtcgccatgttgtgctc
aataaatcttatggtgcgccaaccatcactaaagatggcgtctctgtcgccaaagagatt
gagctcgccgataaattcgaaaacatgggcgcacaaatgctcaaacaagtggcgtccaaa
gccaacgacgaagcgggcgatggcactaccacagcaaccgtgttggcccaagcgctgatc
aatgaagggatgaaggcggtcgccgctggcatgaaccccatggatcttaagcgcggtatc
gacaaagcagtctccgcagcggtcgagaaattgcaccaactggccaaaccttgcagtgac
acccaatcgatcactcaagtcggtgccatttccgctaatagcgatcacgcgatcggtgaa
atcatcgcgcaagcgatggagaaagttggccgcaatggtgtgatcacggttgaagaggga
caagctctacaaaacgagctttcggtggttgaaggtatgcaatttgatcgcggttacctt
tccccttacttcatcaaccaacccaaagcgggctgtgttgagttggagaatccctacgtc
ttgctagtagacaagaaaatcagccacattcgtgaactgctaccgattttagaatccgtg
gctaaagcttcccgttcgctgctgatcattgctgaagatgtggatggcgatgcgcttgcg
acattagtggttaacagcatgcgtggcatcattaaagtggcagcggtgaaagcgccaggc
tttggtgaacagcgcaaagcaatgctcgaggacatcgcggccctcactgctggccgagtg
attagcgaggaaataggtcttgagcttgaaaaagtgacgctggacgatctgggtagcgcg
aaaaaagtcaccatcaataaagacaataccacgattgtcgatggcgctgccgagccaagt
gccctccaagatcgcatcgcgcagatccaacatcaattggaacacaccacatcgcaatac
gatcgggacaaattgcagcaacgcattgccaaactctctggtggggttgctgtgatcaag
attggtgcggcaacagaagtggagatgaaagagaaaaaagatcgcgtggatgatgcattg
cacgccactcgcgccgcagtggaagaagggattgtggccggcggtggtgtcgctctgctg
aaaattgccaacgagctcagcaatttacaaggtgataatgacgatcaaaatgtcggcatt
cgcattgcgctaagagcgatggaagaaccactgcgtcaaatcgccatcaacgcaggggat
gaagcttcagtgatcgcaaatcaagtcaaaacgggcgatgagcattacggctacaacgct
gccaccggccaatttggcaatatgttagagatgggcattttggatcctgcgaaggtgaca
cgctcagcgctacagtttgccgcaagcattgctggcttgatgatcaccaccgaagccatg
gtcagcgaagtagacaaagagtctgcggcgtaa
DBGET
integrated database retrieval system
