Vibrio cholerae O1 El Tor N16961: VC_A0952
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Entry
VC_A0952 CDS
T00034
Name
(GenBank) transcriptional regulator, LuxR family
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VC_A0952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vch03000
]
VC_A0952
Transcription factors [BR:
vch03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
VC_A0952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
TubC_N
HTH_24
GNVR
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
AAF96848
UniProt:
Q9KKZ8
Structure
PDB
PDBj
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All DBs
Position
II:complement(901426..902100)
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AA seq
224 aa
AA seq
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MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVID
YSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIK
GMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIA
DKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgaaaacaaactaaacgttagaatgctttctgatgtttgcatgcaatccaga
ttgttgaaagaggcgttagaatcaaaacttcctttggcgctggaaattacaccattttct
gagctctggcttgaagagaataaaccagaaagtcgcagtattcagatgctggtgattgat
tattctagaatttctgatgatgttttgaccgattacagctcgtttaagcacatcagttgt
cctgatgcgaaagaggtcatcataaactgtccgcaggatattgagcataagctgctcttt
aagtggaataatttggctggagtattttatattgatgatgatatggataccctgatcaaa
ggcatgagtaaaattttgcaagatgaaatgtggttaacgcgtaaactggcccaagaatac
attctccattatcgtgccggtaactcagtcgtgacctcacaaatgtacgcaaaattaacc
aaaagagaacaacagattatcaagttacttggtagtggtgcttctaatattgaaattgca
gataaactctttgtgagtgaaaatacagtaaaaacacatctgcataatgtctttaagaaa
attaatgccaaaaatcgcttgcaggcactgatttgggcgaaaaataatattggaattgag
gaagtcaattcttaa
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