KEGG   Vibrio cholerae O1 El Tor N16961: VC_A0952
Entry
VC_A0952          CDS       T00034                                 
Name
(GenBank) transcriptional regulator, LuxR family
  KO
K20918  LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vch  Vibrio cholerae O1 El Tor N16961
Pathway
vch05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vch00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    VC_A0952
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vch03000]
    VC_A0952
Transcription factors [BR:vch03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    VC_A0952
SSDB
Motif
Pfam: VpsT-like_REC GerE Sigma70_r4_2 Sigma70_r4 HTH_23 TubC_N HTH_24 GNVR HTH_40 HTH_10
Other DBs
NCBI-ProteinID: AAF96848
UniProt: Q9KKZ8
Structure
LinkDB
Position
II:complement(901426..902100)
AA seq 224 aa
MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPESRSIQMLVID
YSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIK
GMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIA
DKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
NT seq 675 nt   +upstreamnt  +downstreamnt
atgaaagatgaaaacaaactaaacgttagaatgctttctgatgtttgcatgcaatccaga
ttgttgaaagaggcgttagaatcaaaacttcctttggcgctggaaattacaccattttct
gagctctggcttgaagagaataaaccagaaagtcgcagtattcagatgctggtgattgat
tattctagaatttctgatgatgttttgaccgattacagctcgtttaagcacatcagttgt
cctgatgcgaaagaggtcatcataaactgtccgcaggatattgagcataagctgctcttt
aagtggaataatttggctggagtattttatattgatgatgatatggataccctgatcaaa
ggcatgagtaaaattttgcaagatgaaatgtggttaacgcgtaaactggcccaagaatac
attctccattatcgtgccggtaactcagtcgtgacctcacaaatgtacgcaaaattaacc
aaaagagaacaacagattatcaagttacttggtagtggtgcttctaatattgaaattgca
gataaactctttgtgagtgaaaatacagtaaaaacacatctgcataatgtctttaagaaa
attaatgccaaaaatcgcttgcaggcactgatttgggcgaaaaataatattggaattgag
gaagtcaattcttaa

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