Vibrio cholerae O1 El Tor N16961: VC_A0996
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Entry
VC_A0996 CDS
T00034
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VC_A0996
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vch02000
]
VC_A0996
Transporters [BR:
vch02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VC_A0996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
AAA_21
AAA_16
Septin
Motif
Other DBs
NCBI-ProteinID:
AAF96892
UniProt:
Q9KKV4
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All DBs
Position
II:949658..951517
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AA seq
619 aa
AA seq
DB search
MFKLFEGFTDPFPKGEPQRPPNTLWAFCRHYTRGFEKPLIVMALLSTAIAIIEVSLFGFM
GQLVDWLSTSSPDTFLTENQSTLIGLGLLVLVGMPLLIAFYSLLIHQSLLGNYPMSIRWL
AHRYLLKQSVSFYQDEFAGRISTKVMQTALAVRETVMKSLDVFVYVMVYFTAIVVILAQA
DWRLMIPMLIWLAIYVTVQMYYVPKLKKVASEQADARSLMSGRIVDSYTNIMTVKLFSHS
QRETQYAEEGMQDFLGTVHRQMRLVTGFNIWVEMANYLLVFTIAALSIYLWITSAISVGA
IAVAVSLSLRINGMSKWIMWEVSALFENIGTVVDGMTMLGKPITVTDKPDAKPLVVKHGG
ITFDDVSFHYGENKGVINHLNLNIKPGEKVGLVGRSGAGKSTLVNLLLRFHDVESGRILI
DGQPISEVTQESLRSKIGMVTQDTSLLHRSIRDNILYGNPNATEEQLLKATAQAHAHEFI
LGLTDPHGNSGYDAQVGERGVKLSGGQRQRIAISRVLLKDAPLLVLDEATSALDSEVEAA
IQESLNELMQGKTVIAIAHRLSTIAAMDRLIVLDKGQIVEQGTHQELIAQNGIYAHLWAH
QTGGFIGCDEDEVEEAILA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagctatttgaaggtttcaccgacccttttcccaaaggtgaaccccaacgccca
cccaacactttgtgggccttttgtcgccactacactcgcgggtttgaaaaaccattgatc
gtgatggcgttactcagcacggcgatcgcgattatcgaggtctctctgtttggctttatg
ggccaactggtggactggctttccactagctcgccagacacatttttaaccgaaaaccag
agcactttgattgggttaggcttattggtattggtcggtatgccgctactgatcgccttc
tattcactactgatccaccaatctttgctcggtaactacccgatgtcgatccgttggttg
gcgcaccgctatctgctcaagcaaagcgtgtcgttttatcaagacgagtttgcagggcgc
atctcaaccaaagtgatgcaaacggcgctcgcggtacgtgaaaccgtgatgaaaagtctc
gatgtgtttgtgtatgtgatggtttatttcaccgcgattgtagtgattttggcgcaggct
gattggcgcttaatgatcccgatgctgatttggctggcgatttacgttacggtgcaaatg
tattacgtgcctaagctgaaaaaagtcgcttccgagcaagccgatgcccgctcactgatg
agcggccgtatcgtcgatagctacaccaacattatgactgtaaagctgttttcgcacagt
caacgtgaaacgcaatacgccgaagaaggcatgcaagattttctgggcaccgtccatcgc
caaatgcgtttggtgaccggttttaatatttgggttgaaatggccaactacttattggtg
tttaccattgctgccctgtcgatttatctgtggatcactagcgccatcagcgtcggtgcc
attgcggttgcggtcagtttatccttgcgtatcaacggcatgtctaagtggatcatgtgg
gaagtcagcgccctgtttgaaaacatcggtaccgttgtggatggcatgaccatgctgggc
aaacccatcaccgtcaccgacaaacctgacgcgaaacccttggtggttaagcatggtggc
attacctttgatgatgtgagcttccactacggtgaaaacaaaggcgtgatcaaccatctc
aatctcaacattaaaccgggtgaaaaagtcggtttagtggggcgctctggagccggtaaa
tcgaccttggtgaacctgttactgcgttttcatgatgtagagagcggccgaattctcatt
gatggtcaacccatttcggaagtgacccaagaatcgctgcgcagcaaaatcggcatggtg
acacaagatacgtcactgctgcaccgctccattcgcgacaacattttgtacggcaatccg
aacgccaccgaggagcagcttttgaaagcaacggcgcaagcccacgctcatgagttcatc
ctcggtttgaccgatccgcacggcaacagtggttacgacgcacaggtcggtgaacgtggc
gtcaaactctctggtggacaacgtcagcggattgcgatctctcgcgtactgctcaaagat
gcgccactgttggtgctggatgaagcgacttccgcgctcgattctgaagtggaagcggcg
attcaagagagcctcaatgagctgatgcagggcaaaaccgtgattgcgattgcccaccgt
ctgtcgaccatcgcagcgatggatcgcctgatcgtgctcgataaaggccaaattgttgag
caaggtactcaccaagagttgattgcgcaaaacggcatttatgctcacctgtgggcgcat
caaaccggtggctttatcggctgtgatgaagacgaagtagaagaagccatactggcataa
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