Vibrio cholerae O1 El Tor N16961: VC_A1029
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Entry
VC_A1029 CDS
T00034
Name
(GenBank) glycogen operon protein GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch00500
Starch and sucrose metabolism
vch01100
Metabolic pathways
vch01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VC_A1029
Enzymes [BR:
vch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
VC_A1029
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
AAF96925
UniProt:
Q9KKS1
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All DBs
Position
II:977379..979349
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AA seq
656 aa
AA seq
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MKMNLSTPFPLGATLDAEGCNFAIYAPANRDILLALFHADGSYETHQLEHEYAGVKHTHI
SGIHAGQKYGYLIQLNDELHYISDPYARALEGPLHYAPPFDSHKSFDLPKCVVTDTHFDW
QNVAKPRIARDEMVLFETHVKGLTQLNPDVEKALRGKYLGLVSQPMLDFYRQQNINTLQL
LPIAACMHEPHLLESGKVNYWGYNPYVFMAPDPRYASKDAVNELKTTIRELHRNGIQVIL
DVVYNHTAEGGTNGPVFNLKALDPNYYLHHGDHYANYTGCGNTVDLSNQAALNLVMDTLR
CWVTEYQIDGFRFDLAATLGRRGDEFSKEAAFFKAVAQDPVLREVKLIAEPWDIGPNGYQ
VGNFPFGWNETNDKLRDITRSFWRGDLGFLKEFATRLMGSRDLYSAANWPYKLTVNYITY
HDGFTLQDLVSYKHKHNEANGEQNRDGHGDNRSDNYGFEGDTDSIVIRATRERQKRNFMA
SLLFAFGIPHILTADVLSHTQKGNNNAYCQDNDISWLNWENNETKQDFREWLAGMVAARQ
TYMVPFIRAFSGENRNNNRIAWRRVDGKPMEMDDWNRLSSVALHIGIGSDGPEMLYLINQ
TNAPARFVLPKDRQQDWRLICDTNMRHAQHGHAEGEVLQLPVSMSILHYQPKKKSA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaacctgtcaacgcctttcccattaggagcaacactcgatgcagagggttgt
aactttgcgatttatgctccagccaatcgagatattctcttggctctctttcatgctgac
ggtagctatgaaacacatcagcttgaacatgaatatgcaggggtcaaacatacgcatatt
tctggcattcatgctgggcagaaatacggttatttaatccagctcaatgatgaattgcat
tatatttctgacccttacgctcgagcgttagaagggccgctgcattatgctccgccattt
gacagccataaaagttttgatctgccaaaatgtgtagtcacagatacccactttgattgg
caaaacgtggctaagccgcgtatcgcccgagatgagatggtgttatttgaaacccatgtc
aaagggttaacccaattaaatccggatgtagaaaaagccctacgtggcaaatatttaggg
ttggtgagccaacctatgctggatttttatcgccagcaaaatattaatactctgcagcta
ctcccaattgcagcttgtatgcatgagccccatctcttggaaagtggcaaggtcaattat
tggggttataacccttatgtatttatggcccccgatccacgttacgcaagtaaagacgcc
gtcaatgaactaaaaaccaccatccgtgagctgcatcgcaacggcatccaagtcattttg
gatgtggtgtataaccacactgcagaaggtggaaccaatggaccggtgttcaacctcaaa
gcccttgatccaaactactatctgcaccatggcgatcactacgccaactacacgggatgt
ggcaacacggtcgatctctccaaccaagcggctctgaatttagtgatggacacgcttcgc
tgttgggtaacagaatatcagattgacggttttcgtttcgatttagccgccaccctcggc
cgacgtggtgatgagttcagcaaagaagcggcctttttcaaagccgttgcacaagatccg
gtgctgcgcgaagtaaagctgattgccgaaccttgggacattggccccaatggctaccaa
gtgggtaactttccttttggttggaatgaaaccaacgacaaactacgcgatattacccgt
agcttctggcgtggcgacctaggctttttgaaggagtttgcaacacgcctcatgggttca
cgcgacctctacagcgcggctaactggccttacaaactgaccgtcaactacatcacctat
cacgatgggtttacgctgcaagatttagtgtcttataaacacaaacacaacgaagcgaat
ggcgaacaaaaccgcgatggccatggtgataaccgctcagacaactacggttttgaaggt
gacaccgacagtatcgtgatccgcgcgactcgtgagcggcagaaacgtaactttatggct
agcctgctgtttgctttcggtattccacacattctcaccgccgatgtgctctcacacact
caaaaaggcaacaataacgcttactgtcaagacaacgacatcagctggttaaactgggaa
aacaacgaaaccaaacaagattttcgtgaatggcttgccggtatggtagcagcaagacaa
acctacatggtgccctttattcgcgcatttagtggcgaaaaccgtaacaataaccgtatt
gcttggcgtagggtggatggcaaacctatggaaatggatgactggaatcgcctctcctcg
gtcgccttgcatatcggcatcggtagtgatggccctgaaatgttgtatttgattaatcaa
accaacgcgccagcgcgctttgtgctccctaaagataggcagcaggattggcgtttgatt
tgcgataccaatatgcgccatgctcagcatggtcatgctgaaggtgaagtgttgcaactg
cctgtttcaatgtcgattctgcactatcaaccaaagaaaaaatcggcttaa
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