Vibrio cholerae O1 El Tor N16961: VC_A1113
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Entry
VC_A1113 CDS
T00034
Name
(GenBank) spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vch
Vibrio cholerae O1 El Tor N16961
Pathway
vch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VC_A1113
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vch02000
]
VC_A1113
Transporters [BR:
vch02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
VC_A1113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
PrpR_N
CdiA_helical
Motif
Other DBs
NCBI-ProteinID:
AAF97004
UniProt:
Q9KKJ4
LinkDB
All DBs
Position
II:1068927..1069958
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AA seq
343 aa
AA seq
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MKTFIKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNES
MYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNK
FSLPYIWGITGLYYNSSTLPNGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSIN
TKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKF
VMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLP
AELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLRNQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttcattaaaggattggtactttctgcagtcgttgcctcttctcaggtttat
gcagagcaaaccctaaacgtgtatgcgtggggtggctatctgccagagaagtcgctgaaa
gcttttgaacaacaagaaggcgttactattaactattcaacctttgagaataatgagtca
atgtataccaaactcaaacttctgaaaggcactggttacgatgtcgtgtttgcgtccgct
tattttatcgaaaagatgggccgtgaagggctactggcagaaatcgatcataaccaaatc
ccgaacatgaaagatgcaatgccaaccgtattaggactggcgcacgatcctcaaaacaaa
ttctcactcccttacatttgggggattacgggtctttactacaactcgtctaccctgcct
aacggaatcacaaaatgggcagatctgtgggataagcaatacgaacagcaagtcatgctg
attgacgatatccgcgacgtgtttggtatggctctaaagcttaacggctttagcatcaac
accaaaaatgaagaggaaatcaagaaagcgtacgaatctctggtggcactgaagaaaaac
gtattgctgtataactcagatgcgccacacgtgccttacgtttctggcgaagccacactg
ggcatgcagtggaacggcaacgcttaccaaggccaagtggaaatgcctgagctgaaattc
gttatgccagaagaaggcgcggtactgtggatggataacttcaccattccttcaggcagc
aagaacattccgttggcgcacaagtttattaactttatgtaccaaccagaaaaccaagct
gagattgtacaaagcttaggttatgcctctgccaccaaaggcggtcgagcgctgctaccg
gcagaactgcgtgataacccgactatcttcccatcggatgaagatatgaaaaaaggcgag
ttcattaacgatgtcggcccagaaacgctggcgatttatgaaaagtactggcagcgccta
agaaaccaataa
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