Vidua chalybeata (village indigobird): 128781835
Help
Entry
128781835 CDS
T11587
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03013
Nucleocytoplasmic transport
vcha03015
mRNA surveillance pathway
vcha03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128781835 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
128781835 (NCBP1)
03015 mRNA surveillance pathway
128781835 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128781835 (NCBP1)
03041 Spliceosome [BR:
vcha03041
]
128781835 (NCBP1)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
128781835 (NCBP1)
Spliceosome [BR:
vcha03041
]
Common components
Common spliceosomal components
Cap binding complex
128781835 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
ApoA-II
Motif
Other DBs
NCBI-GeneID:
128781835
NCBI-ProteinID:
XP_053787785
LinkDB
All DBs
Position
Z:47763331..47793651
Genome browser
AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQAESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWCQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYVWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatggacagccccacaagaggcggaggacg
tccgagccgtcggaaattgaggagaggctcgagtcactcatctgcagggtgggagagaag
agtaattcatctttggagagcaacctggagggtctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatactgtgtactgttgcacgtctgctaccagaa
aagcttactgtttacacgacattggtgggcttgctgaatgccaggaactacaattttggc
ggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtaaacatgtat
aatgaagctgtgcatttagtacgttttctgtccgatctcgtgaattgccatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaggacgta
ccccaagtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggtcgga
aaggagttatatgagaagaaggatgctgaaatggatcgtctcttgtctcaggcagaaagt
tatctgaaacgccgccagaagattcatgtacccatgctgcaagtgtggactgctgacaaa
ccacatccacaagaagagtatttagactgcctttggtgtcagattcagaaattgaaaaaa
gaccgttggcaggagcggcatatcctgagaccctacttggcttttgacagtgttctctgt
gaggcactgcaacacaatctgcctcccttcacacccccacctcacactgaagattctgta
tacccgatgccaagggttatttttaggatgtttgactacacggatgaccctgagggtcct
gtcatgcctggcagccactctgttgagagatttgtaatagaggagaacctccactgcatc
atcaaatctcactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccctttgaactaccatatagtagaggtaatatttgcagagttgtttcaa
ctgccatctccaccacatattgaagtcatgtacacaacgctgctgattgagctgtgcaaa
cttcagcctggctccttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggacacaatgaatacaacatgtgtggacagatttattaactggttttcacaccacttg
agcaactttcagttccgttggagctgggaagactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaagttttggaaaagtgcatgagactctcctac
catcagcgaataatagacatcgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatacggagatgagagcaataggtctcttcctggatatactgtagca
ctctgtttaacaattgcaattaaaaataaggccagcaatgatgaaatcttcagcatttta
aaagatgtacctaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtcttttagccac
tccttcagcgcccttgcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaagcttcatgttctgagagttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacgcaaattgttgactgtgctgcagtagcgaac
tggatattttcttcagagctggcacatgattttaccaggttttatgtctgggagatctta
cattccacaattcgtaagatgaataagcatgtcctgaagattcacaaagaactggaggag
accaaagcaagattggccaggcagcacaaaagacgggacagtgatgatgatgatgacgat
gatgaccgaagcactgatcgggaagatggaccactggaagagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctctttcttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgtgagacaggtggaattgatgtattt
acaccctggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtaacgctagagaacctcctgtttacagctgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
DBGET
integrated database retrieval system
