Vidua chalybeata (village indigobird): 128782211
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Entry
128782211 CDS
T11587
Symbol
CDK7
Name
(RefSeq) cyclin-dependent kinase 7 isoform X1
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03022
Basal transcription factors
vcha03420
Nucleotide excision repair
vcha04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128782211 (CDK7)
09124 Replication and repair
03420 Nucleotide excision repair
128782211 (CDK7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128782211 (CDK7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vcha01001
]
128782211 (CDK7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcha03021
]
128782211 (CDK7)
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128782211 (CDK7)
03400 DNA repair and recombination proteins [BR:
vcha03400
]
128782211 (CDK7)
Enzymes [BR:
vcha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
128782211 (CDK7)
2.7.11.23 [RNA-polymerase]-subunit kinase
128782211 (CDK7)
Protein kinases [BR:
vcha01001
]
Serine/threonine kinases: CMGC group
CDK family
128782211 (CDK7)
Transcription machinery [BR:
vcha03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128782211 (CDK7)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
128782211 (CDK7)
DNA repair and recombination proteins [BR:
vcha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128782211 (CDK7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Kinase-like
ABC1
Seadorna_VP7
FTA2
Haspin_kinase
RIO1
APH
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
128782211
NCBI-ProteinID:
XP_053788416
LinkDB
All DBs
Position
Z:complement(28341993..28360019)
Genome browser
AA seq
343 aa
AA seq
DB search
MDARARAKRYEKLDFLGEGQFATVFKAKDKTNNQIVAIKKIKLGHRSEAKDGINRTALRE
IKLLQELSHPNIIGLIDAFGHKSNISLVFDFMETDLEVIIKDTSIVLTQSHIKAYMLMTL
QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRVYTHQVVTRWYRAPE
LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPGMTS
LPDYVTFKPFPGMPLQHIFSAAGDDLLSLLQGLFTFNPSTRVTATQALKQKYFSNRPGPT
PGNQLPRPNCPAEAAKEQQNALLNLKRKRTEGIDQGLPKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcgggcccgcgccaagcgctacgagaagctcgacttccttggggaggggcag
ttcgccaccgtttttaaagccaaggacaagacgaacaaccaaatcgtggctattaagaag
attaaactggggcatagatcagaagctaaagatgggatcaacaggactgccctcagggaa
ataaaactgttacaggagctaagccatccaaatattattggtcttattgatgcatttgga
cacaagtcaaatattagtctggtatttgattttatggaaacagatttagaggttattata
aaggatacaagtattgtgttgacgcagtctcacatcaaggcatatatgctgatgacactt
caaggattagaatatttacatcagcattggattctacacagggatcttaaaccaaataac
ttgttgctagatgaaaatggagttttaaaattggctgactttggcttggcaaaatctttt
ggaagcccaaacagagtttatacccaccaggtagtaacaaggtggtaccgagccccagaa
ctattgtttggggctagaatgtatggtgttggtgttgatatgtgggctgttggttgtatt
ttagctgaattgctcctcagagttccttttttgcctggagactctgatcttgaccagctg
acaaggatatttgaaacactgggcactccaacagaagaacaatggcctgggatgacaagt
cttccagattatgtcacatttaagccgttccctggaatgccacttcaacatatcttcagt
gcagctggtgatgatctgctcagtcttcttcaaggcttattcacgtttaatccttccact
agagtaacagctacgcaggcattgaaacagaagtatttcagtaaccgaccaggacccact
ccaggaaatcagctgccaagacccaactgtcctgctgaagctgcaaaggagcaacaaaat
gcacttttaaatttaaaaaggaaaagaacagaaggaatagatcaaggattaccaaaaaaa
ctgattttttga
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