Vidua chalybeata (village indigobird): 128782687
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Entry
128782687 CDS
T11587
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04517
IgSF CAM signaling
vcha04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128782687
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128782687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
vcha04812
]
128782687
Cytoskeleton proteins [BR:
vcha04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128782687
Intermediate filaments
Intermediate filament-binding proteins
128782687
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CH_2
Motif
Other DBs
NCBI-GeneID:
128782687
NCBI-ProteinID:
XP_053789120
LinkDB
All DBs
Position
35:20390..57442
Genome browser
AA seq
2448 aa
AA seq
DB search
MAAELDNVEAAPPPNNNNGPWDPPPEPRAWGDPKIFECSRIKALADERDAVQKKTFTKWV
NAHLARAACRVGDLYSDLRDGFVLTRLLEVLSGETLPKPTRGRMRIHSLENVDKALQFLK
EQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIKTEDNRETRSAKDALLLWCQ
MKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLIDFHKLTKSNATYNLQQAFNTAEQH
LGLSKLLDPEDVNMEDPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQVMEIAAIT
ARYEALAAELLAWIHHTVTIITNQKFANSLTGVQQQLQAFTAFCTLEKPVKFQEKGNLEV
LLFTIQSKLRATNRKLYVPSEGKSISDINKAWTCLEKAEHEREVALRNELIRQEKLELLA
QRFDHKAIMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVVVEL
ALEMESEGYYDTRRIGAQKDNILRQWALLTELVRARRARLEQNLALQKIFQEMVYMIDWM
EEMQVLLVSKDLGKHLLEVEDLLQKHGLLEADISAQTERVQALNAAALKFSELEGYQPCD
PQIICNRVNHVQTCLEELEELAAKRRKELEDSRQLWTFFQEMEEAEAWIREKEKILAAKS
CGRDLSSVVTLTNKHKTMLGELGNRRALLHQTMKKGEKILAKKSFSSVGIQEKMREVCLR
WKKLEEVTGLHQQRLEDALNFFQFSAETDDLVAWLQDTYRIVSSDDFGHDDYSSQALLRK
HRAVVDEVEKHRAAVLSLRKQLALLAPDHRQGVDVQIRVVEVEQLYGEVAEVAVLRTQWL
QDALAVYRMFSEVHACEVWVDEKEQWLEKMEVPEELDEVEVVQHRFESLDQEMNSVMGRI
LDVNQVVQQLVDGGHPSSDEVRSCQDHLNSRWNRVVELVENKKSQLSSVLKIQNFLLECS
EMKAQVREKRKAIEATQSGGSDLGGVLALQRRLSTMEAALVVLEPRLVELQQEGEALAAA
HPGRALEILLPFEEIGEEWDNLKRALQGCEDTLTVAGRLQQFIQDLDNFLGWLVKTQAAV
GSEEVPDSLAEAERLLNVHVALKEEINGYEEDYAKIQAASELLALEEMEVPHLSLQQWLQ
KLDAGWGKLLQSWEMRREVLVQSHVFHLFLRDVQQCQNSLYNQETTLAHAELPDTVEGVT
KALKKHKDFTTTLELNLQKVQLVLQAGESLRRQRNLHSDRVAEAMEGLRAKSQRNHQLAQ
EWTRRLQDHLELQRFLQDCRELDGWIRDKALMAGDPSRDPPPRDPPKPWLQHPAFLAELA
QNREWLQRIEKEGEELVQAKPELSGAVRRQLEELRRCWQELETTSQARSRRLAEAAAAER
LARSYADMEARLGRLEEQLETVGSGADLRSVSRQLKRLQTMESQVEEWYKEVGELQAQAA
ALPAQAAGRDAVGERQSAVGTRIVRLIEPLKERRRILLASKEVHQVSHELEDEVMWVQDR
LPLAMLKDHGTNLQTVQQFIKKNQNLRREIQVHRPRVDEVLERAAAVASIKSPEAEGVRC
LLERLGTMWAELQEQTERRQQALDATYQLEQYYFDVAEVESWLGEQELLLMNEEKGKDEQ
STLQLLKKHLLTEQTIENYEETIAQLSRQCRALLELGHPQSEQVSRRQSQVDRLYVSLKD
LVEERKVKLEQQYWLYQLNREVDELEHWIAEKEVVAGSPELGQDFEHVTLLQEKFLEFAS
ETGSVGQERIAAVNQMVDELIDYGHTDAATIAEWKDGVNEAWADLLELMETRAQMLAASH
ELHKFFNDCKEVLGQIEEKRQRLPELAAREGRTSAGALQRALGAFEHDVEVLVTQVRQLQ
EGAAQLRTLYAGDNAEAIAGREQEVLRAWKELLAACEECRLHVASVADKIRFVGAARDLL
AWMDGVLHQMGAGEKPRDVSSVELLMNDHQSLKTEMEARAKNVATCLELGKTLILSKSPA
ADEIKSHMEKLLAKKKEMTEKWDKHWEWLQQMREVHQFAQEAVVADAWLTAQEPLLKSQE
LGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKLKAEQNKQPPTPLLTRKFLG
EPREVPTLAGXEPRVAYVRHELRPERLQPKLDRVQPPAADGGPAEPPPATAAVTAAAAAE
PPVATKAEEPGEVRPGPPERRRERRERRLERQESSEPEPPRHDGKGGGSKATLADIVEQL
QEKEAGGPVPASPRDRDSPARLPAGPEALPERTPRPDRPRARDRPKPRRRPRPKDSAQGP
GEPRRSRSAPAQGSAPPPPPPPAHTVTHEGFLLRKHELDGAGKKASNRSWVNLYCVLAKG
DLGFYKDAKGPAAGATHGGEPLLSLHRAASEVANDYKKKKNVFKLKTGDGSEFLLQAKDE
EDMQGWLRALAASAQEHAELARWQQGLLTTSSTDEGLPRRDTDRPRRK
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagctggacaacgtggaggccgcccctccccccaacaacaacaacggcccc
tgggacccccccccggagccccgagcctggggggaccccaaaatcttcgagtgctcccgg
atcaaggccttggcagacgagcgggacgcggtgcagaagaagaccttcaccaagtgggtg
aacgcccacctggcgcgcgccgcctgccgcgtcggcgacctctactcggacctgcgcgac
ggcttcgtgctcacgcggctgctcgaggtgctctcgggggagaccctgcccaagccgacg
cggggccggatgcggatccactccctggagaacgtcgacaaggccctgcagttcctcaag
gagcagcgcgtccacctggagaacgtcggctcccacgacatcgtggacggcaaccaccgc
ctgaccctcggcctcatctggaccatcatcctccgcttccagatccaggtgatcaagatc
aagaccgaggacaaccgggagacgcgctcggccaaggacgcgctgctgctctggtgccag
atgaagacggcgggctaccctgaggtcaacatccagaacttcaccaccagctggagggac
ggcctggccttcaacgccctcatccacaggcaccggccggatctcatcgacttccacaag
ctgaccaagtccaacgccacctacaacctccagcaggccttcaacacggccgagcagcac
ctggggctcagcaagctgctggaccccgaggatgtcaacatggaggaccccgatgagaag
tccatcatcacctacgtggtgtccttctaccactacttctccaagatgaaggcgctggcg
gtggaggggaagcgcatcgggaaggtgctggaccaggtgatggagatcgcggccatcacg
gcgcgctacgaggcgctggcggccgagctgctggcctggatccaccacaccgtcaccatc
atcaccaaccagaagttcgccaactcgctgaccggcgtccagcagcagctccaggccttc
accgccttctgcaccctggagaaacctgtcaagttccaggagaaggggaacctcgaggtg
ctgctcttcaccatccagagcaaactccgggccaccaaccgcaagctctacgtgcccagc
gagggcaagagcatctccgacatcaacaaggcctggacctgcctggagaaggcggagcac
gagcgggaggtggccttgaggaacgagctgatccggcaggagaagctggagctgctggcc
cagcgcttcgaccacaaggccatcatgagggagacgtggctcaacgagaaccagcgcctg
gtctcgcaggacaacttcggctacgacctgccggcggtggaggcggccatgaagaagcac
gaggccatcgaggccgacatctcctcgtaccaggagcgcatccaggtggtggtggagctg
gccctggagatggagtccgagggctactacgacacgcggcgcatcggcgcccagaaggac
aacatcctgcgccagtgggcgctgctgaccgagctggtccgcgcccgccgcgcccgcctc
gagcagaacctggccctccagaagatcttccaggagatggtctacatgatcgactggatg
gaggagatgcaggttcttctggtctccaaggatttggggaagcatctgctggaggttgag
gacctcctgcagaagcacgggctgctggaggccgacatctcggcccagaccgagcgcgtc
caggccctcaacgccgccgcgctcaagttctccgagctggagggctaccaaccctgcgac
ccccagatcatctgcaaccgcgtcaaccacgtccagacgtgcctggaggagctggaggag
ctggcggccaagaggaggaaggagctggaggactcccgccagctctggaccttcttccag
gagatggaggaggccgaggcctggatccgcgagaaggagaagatcctggccgccaagagc
tgcggccgcgacctcagcagcgtcgtgaccttgaccaacaaacacaagaccatgctgggc
gagctgggcaaccgccgggcgctgctgcaccagaccatgaagaaaggcgagaagatcctg
gccaagaagtccttcagctccgtgggcatccaggagaagatgcgagaagtctgcttgcgg
tggaagaagctggaggaggtcacggggctccaccagcagcgcttggaggacgccctgaac
ttcttccagttcagcgccgagacggacgacctggtggcctggctgcaggacacgtaccgc
atcgtgtccagcgacgacttcggccacgacgactactccagccaggccctcctgcgcaag
catcgcgccgtggtggacgaggtggagaagcaccgcgccgccgtcctgtccctccgcaag
cagctggctctcctggcccccgaccaccggcagggcgtggacgtccagatccgcgtggtg
gaggtggagcagctctacggcgaggtggccgaggtggccgtgctgaggacgcagtggctg
caggacgcgctggccgtctaccgcatgttcagcgaggtccacgcctgcgaggtgtgggtg
gacgagaaggagcagtggttggagaagatggaggtgcccgaggagctggatgaggtcgag
gtggtccagcacaggttcgagagcctggaccaggagatgaacagcgtcatggggcgcatc
ctggacgtcaaccaggtggtgcagcagctggtggatggtggccaccccagctcagatgag
gtccggtcctgccaggaccacctcaacagccgctggaaccgggtggtggagctggtggag
aacaagaagagccagctcagctccgtgctgaagatccagaacttcctcctggagtgcagc
gagatgaaggcgcaggtgcgggagaagaggaaagccatcgaggccacccagtccggcggc
agcgacctgggcggggtcctggccctgcagcgccgcttgtccaccatggaggccgccctg
gtggtcctggagccacggctggtggagctccagcaggagggcgaggccttggctgccgcc
caccccggccgcgccctggagatcctgctgcccttcgaggagatcggcgaggagtgggac
aacctcaagcgggccctccaaggttgcgaggacaccttgaccgtggccggccgtctccag
cagttcatccaggacctggacaacttcttggggtggttggtgaagacccaagcggccgtg
ggctccgaggaggtccccgacagcttggccgaggccgagaggctgctgaacgtccacgtg
gccctcaaggaggagatcaacggctacgaggaggactacgccaagatccaggcggccagc
gagctgctggccctggaggagatggaggtgccccacctgtccctccagcagtggctgcag
aagttggacgcgggctgggggaagctcctgcagagctgggagatgaggagggaggtcctg
gtgcagtcccacgtcttccacctcttcctgcgcgacgtgcagcagtgccagaacagcctc
tacaaccaggagaccaccctggcccacgccgagctgccggacacggtggaaggggtgacc
aaggcgctgaagaagcacaaggacttcaccaccacgctggagctgaacctgcagaaggtc
cagctggtcctgcaggccggcgagagcctccggcgccagcgcaacctccacagcgaccgc
gtggccgaggccatggaggggctccgggccaagagccaacgcaaccatcagctggcccag
gagtggacgcggcggctccaggaccacctcgagctccagaggttcctccaggactgccgc
gagctggatggctggatccgcgacaaggcgctgatggcgggggacccctcgcgggacccc
cccccccgggacccccccaagccctggctgcagcaccccgccttcctggccgagctggcg
cagaaccgcgagtggctccagaggatcgagaaggaaggtgaggagctggtgcaggccaag
ccggagctgagcggggccgtgcggcggcagctggaggagctgaggagatgctggcaggag
ctggagaccacgagccaggcccggagccggcgcctggccgaggccgcggccgccgagcgc
ctggcgcggagctacgccgacatggaggcgcggctgggccggctggaggagcagctggag
accgtgggcagcggcgccgacctccgcagcgtcagccgccagctcaagaggctgcagacg
atggagtcgcaggtggaggagtggtacaaggaggtgggcgagctgcaggcgcaggcggcg
gcgctgccggcgcaggcggccgggcgggacgcggtgggcgagcggcagagcgcggtgggg
acgcgcatcgtgcgcctcatcgagcccctcaaggagcgccggaggatcctgctggcctcc
aaggaggtccatcaggtcagccatgagctggaggacgaggtgatgtgggtccaggaccgc
ctgcccttggccatgctgaaggaccacggcaccaacctccagaccgtccaacagttcatc
aagaagaaccagaacctgcgccgggagatccaggtgcaccggccccgcgtggacgaggtg
ctggaacgcgccgccgccgtcgcctccatcaagagccccgaggccgagggcgtgcggtgc
ctcctggagcggctggggaccatgtgggcggagctgcaggagcagacggagcgccggcag
caggccctggatgccacctaccagctggagcagtactacttcgacgtggccgaggtggag
tcgtggctgggagagcaggagctgctcctgatgaatgaggagaaggggaaggacgagcag
agcaccctccagctcctcaagaagcacctcctcaccgagcaaaccatcgagaactacgag
gagaccatcgcccagctctcccgccagtgccgcgccctcctggagctcggccacccccag
agcgaacaggtcagcaggcggcagtcgcaggttgaccggctgtacgtgtctctgaaggac
ctggtggaggagcgcaaggtcaagctggagcagcagtactggctctaccagctcaaccgc
gaggtggacgagctggagcactggatcgccgagaaggaggtggtggccggctcgcccgag
ctcgggcaggacttcgagcacgtcacgctgctgcaggagaagttcctggagttcgccagc
gagacgggcagcgtcggccaggagcgcatcgccgccgtcaaccagatggtggacgagctc
atcgactacggccacaccgacgccgccaccatcgccgagtggaaggacggcgtcaacgag
gcctgggccgacctcctggagctgatggagacccgcgcccagatgttggcggcgtcccac
gagctgcacaagttcttcaacgactgcaaggaggtcctggggcagatcgaggagaagcgt
cagcggctgcccgagctggcggcgcgcgagggcaggacctcggccggcgccttgcagagg
gccttgggcgccttcgagcacgacgtggaggtgctggtgacgcaggtgcggcagctgcag
gagggcgcggcgcagctgcggacgctctacgccggggacaacgccgaggccatcgccggg
cgcgagcaggaggtgctgcgcgcctggaaggagctgctggcggcgtgcgaggagtgccgg
ctgcacgtggccagcgtggccgacaagatccgcttcgtgggcgccgccagggacctgctg
gcctggatggacggggtgctccaccagatgggcgccggggagaagcccagggacgtgtcc
tcggtggagctgctgatgaacgaccaccaaagcctcaagaccgagatggaggcccgggcc
aagaacgtggccacctgcctggagctgggcaagaccctcatcctcagcaagagcccagcg
gccgacgagatcaaatcacacatggagaagctcctggcgaagaagaaggagatgacggag
aagtgggacaagcactgggagtggctgcagcagatgcgcgaggtgcaccagttcgcgcag
gaggccgtggtggccgacgcgtggctgacggcccaggagccgctgctgaagagccaggag
ctgggcagcagcgtggacgaggtggagcagctgatccggcggcacgaggccttccggaag
gcggcggccgcctgggaggagaggttcagctccctgcggcgcctcaccacgatcgagaag
ctcaaggccgagcagaacaagcagccgccgacgccgctcctgacccgcaaatttttgggg
gagccccgggaggtgccgaccctcgccgcggagccgcgcgtcgcctacgtccggcacgag
ctgcggccggagcgcctccagcccaagctcgaccgcgtccagccgccggccgccgacgga
ggacccgccgagccgcccccggccaccgccgccgtcactgcggccgccgctgccgagccc
ccggtggccaccaaggccgaggagcccggcgaggtccggccggggccgccggagcggcgc
cgggagcgccgggagcgccggctggagcggcaggagtccagcgagccggagccgccgcga
cacgacgggaagggcggcggcagcaaagccaccctggccgacatcgtggagcagctgcag
gagaaggaggcgggcggccccgtgccggcttcgccccgtgaccgtgactcccccgcccgt
ctccccgctggccccgaggccctcccggagaggacccctcggccggaccgtccccgggcg
cgggaccggccgaagccgcggcgccggccgcgccccaaggactcggcgcagggcccgggg
gagccgcggcgctcgcggtcggcgccggcgcagggcagcgcgcccccgccgccgccgccg
cccgcccacacggtgacgcacgaggggttcctgctgcgcaagcacgagctcgacggcgcc
ggcaagaaagcgtccaacaggtcttgggtgaacctctactgcgtcctggccaagggcgac
ctgggcttctacaaggacgccaaaggccccgcggccggggccacccacggcggggagccc
ctgctgagcctgcaccgcgccgccagcgaggtggccaacgactacaagaagaagaagaac
gtcttcaagctcaagaccggcgatgggagcgagttcctgctgcaggccaaggacgaggag
gacatgcagggctggctgcgggcgctggccgccagcgctcaggaacacgccgagctggcc
cggtggcaacaaggcctcctcaccacctcctccaccgacgaggggctcccccggcgcgac
accgaccggccccggcggaagtga
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integrated database retrieval system
