Vidua chalybeata (village indigobird): 128782875
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Entry
128782875 CDS
T11587
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vcha03021
]
128782875
03036 Chromosome and associated proteins [BR:
vcha03036
]
128782875
Transcription machinery [BR:
vcha03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
128782875
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
128782875
SLIK complex
128782875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
128782875
NCBI-ProteinID:
XP_053789346
LinkDB
All DBs
Position
W:complement(2008128..2118219)
Genome browser
AA seq
1786 aa
AA seq
DB search
MNGHSDEDVRNSSGESSQSDDDSGSASASESGSSSGSSTDGSSSQSGSSDSESGSESDTS
REKKQGQAKLPPKLDGSEFWKSSPSILAVQRSAVLKKQQQKAASSDSGSEEDSSNSEDSA
DDSSNEAKKNKHRDEDWQMSGSGSVSGTSSDSESEEDREKSSCEDSESDYEPENKVKSRK
PPSRIEPKSGKKIAVQKKRQLDLSDDDDYDKRGSRRQATVNVSYKEAEETKTDSDDLLEV
CGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADGDPNTGFEKSKEPGEIQY
LIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASPEDVEYYNCQQ
ELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQTRID
EYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGHEGLELRDYQLNGLNWLAHSWCK
GNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNA
VVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAHR
LKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKG
REFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALS
KGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLI
RLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDF
CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKASV
EEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFK
EPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEQ
NLRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGKHSRRRRYSGS
DSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELV
DKSELDLRRLGELVHNGCIKALKDNSFGQERAGGRFGKVKGPTFRISGVQVNAKLVISHE
EELAPLHKSIPADPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKM
DPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEVQRLTGAGNSKRKKARS
KKNRATKSAKMKEEIKSDSSPPSEKSDDDVYNEDEIVSVKCPHKKIKAEENEEKPEPDIG
IKMEAVEKRETREKENKRHSKKEKKEKEDKKELKNIKEKRENKLKESTQKEKEVKEEKAN
ELKSENKEKNKKVSLLDIPVHITATSETLPISEESEELDQRTFGVCKERMRPVKAALKQL
DRPEKGLSEREQLEHTRQCLIKIGDHITECLKQYTNPEQIKQWRKNLWIFVSKFTEFDAR
KLHKLYKHAIKKRQESQQHSDQNISNNMNTHVIRNPGVERLKENTNHDDSSRNSSSDRHL
SQYYDHHKDKHQEDAYNKNDSRKRSHSAFSNGKDHRDWDHYKHDSRYYSDGKHRKLDDHR
SRDHRSNLEGSLKDSRPHSNHRSHSDHRIHSDHRSTSEYIHHKSSRDYRYHSDWQIDHRA
SGSGPRSPLDQRSPYGSRSPIGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagatgtaagaaacagtagtggagagtcaagccagtcagat
gatgattctggatcagcatcagcttctgaatctggttcaagctctggaagcagtactgat
ggaagtagcagtcaatctggtagcagtgactctgagtctggttcagagtctgacacatct
agagagaagaaacaaggtcaagctaaactaccaccaaaacttgatggatctgagttttgg
aagtccagtccaagtatacttgctgtgcagagatcagcagtgctcaagaaacaacaacag
aaggcagcctcatcagacagtggttcagaagaggattcatcaaacagtgaagattctgca
gatgactcttccaatgaagccaagaagaacaaacatagagatgaagactggcaaatgtct
gggtcagggtcagtatcaggaactagttctgattctgaatcagaggaagatagagagaaa
agcagttgtgaagatagtgaatctgactatgagccagaaaacaaagtcaaaagccggaaa
cctccaagcagaattgagccaaaaagtggcaaaaagattgcagtacagaaaaagaggcag
cttgatttgtcagacgatgatgactatgacaagagaggatctcgtcgccaggcaacagtc
aatgttagctacaaagaagctgaagaaaccaagacagattctgatgacttgttggaagtt
tgtggagaagatgtcccacagcctgaagaagatgaatttgaaactatagagaagtttatg
gatagtcgaattggccgaaaaggagccactggtgctgcaaccaccatctatgcagttgag
gcagatggtgacccaaatactgggtttgaaaagtcaaaggagccaggagaaatacagtat
cttattaaatggaaaggctggtcacacatccataatacatgggaaactgaggaaacactg
aagcaacaaaatgttaaaggaatgaagaaactggacaactacaagaaaaaggatcaggaa
acaaaacgctggctgaaaaatgcttctccagaagatgtggaatattataactgccagcag
gaacttacagatgatctacataaacagtatcaaatagtggagagaataattgctcattca
aatcagaaatcagcagctggttatccagattactattgcaaatggcaaggtctgccttac
tcagaatgtagctgggaagacggtgctctcattgccaaaaaatttcagacgcgtattgat
gagtattttagcagaaaccaatccaagactactccatttaaggactgcaagattctaaaa
cagaggccaaggtttgttgcactaaagaagcagccatcttatattggaggacatgaaggt
ttagagttaagagattatcagttaaatggactgaactggcttgcccactcatggtgcaaa
gggaatagttgtattcttgcagatgaaatgggtctgggtaaaacaatacaaacaatttct
tttctgaactacttgtttcacgaacatcaactgtatgggcctttcttgctagtcgtgcca
ctttctaccttgacatcttggcaaagagagattcaaacttgggctcctcagatgaatgct
gtggtttacttaggagatataactagcagaaatatgataagaactcatgaatggatgcat
ccacagaccaagcgattaaaatttaatatacttctaacaacttatgaaattttgctgaag
gataagtcattccttggtggtctgaattgggtatttataggagttgatgaagctcatcgt
ttaaaaaatgatgattcacttctgtacaagactttaatagactttaagtctaatcatcgt
cttcttattactggaacccctctgcaaaactcccttaaagagctttggtctttgctgcac
ttcatcatgccagaaaagttttcttcctgggaagattttgaagaggagcatggcaaaggg
agagagtttggttatgcaagtcttcacaaagaacttgaaccatttttactcagaagagtt
aaaaaagatgtagaaaagtctttacctgctaaggttgaacaaattttgaggatggaaatg
agtgcattgcagaagcaatattacaagtggattttaaccaggaattataaagccctgagt
aaaggttcaaaaggtagtacctcgggctttttgaacattatgatggaactcaagaagtgc
tgtaaccattgctacctcattaaaccaccagatgataatgaattctataataaacaggaa
gccttacagcatttaatacgtagcagtggaaaactaatccttcttgacaagctactgatt
cgtctacgagaacgtggcaacagagtactgattttctctcagatggtgaggatgctagac
atccttgcagagtatttgaagtatcgtcagtttccctttcagagacttgatggatcaata
aaaggggaattgaggaaacaagctttggatcattttaatgcagaaggctcagaggacttc
tgctttttgctgtctaccagagctggaggattaggtataaacttagcatctgctgacact
gtagttatatttgattctgattggaatccacagaatgatctgcaggcacaggctagagct
cataggattggacagaagaaacaggttaatatttatcggctagtcacaaaagcatcagta
gaggaagacattcttgaaagagccaagaaaaagatggtgttagatcacttagtaattcag
agaatggacactacagggaaaactgtactacatacaggctctactccctccagctcaaca
ccttttaataaggaagagttatcagcaattttgaagtttggtgctgaggaactttttaaa
gaacctgaaggggaagaagaggagcctcaggaaatggatatagatgaaatcctgaagagg
gctgaaactcgagaaaatgaaccaggtccactgactgtaggagatgagttgctttcacag
ttcaaggtggctaacttttcaaatatggatgaagatgacattgagttggaaccagaacaa
aatttaagaaactgggaagaaatcattccagaagtccagcggcgacgaatagaagaggaa
gaaagacaaaaagagcttgaagaaatatatatgctgccaaggatgagaaactgtgcaaaa
cagatcagctttaatggaagtgaagggaaacacagtaggaggagaagatattctggatct
gatagtgactcagtctcagaaagaaaacgaccaaaaaaacgtggaagaccgcgaactatt
cctcgagaaaatattaaaggatttagtgatgcagagattaggcggtttataaagagttac
aagaaatttggtggcccacttgaaaggttagatgctatagctagagatgctgagctagtt
gataaatctgagctagaccttagacgtctgggagaacttgtacataatggatgcattaag
gctttaaaggacaattcctttggccaagaaagagcaggaggtagatttgggaaagttaaa
ggcccaacattccgaatatcaggagtgcaggtgaatgcaaagttagttatttctcatgaa
gaagagttggcaccattgcacaaatccattcctgcagatccagaagaaaggaaaagatat
gtcatcccatgccacactaaggcagctcattttgatatagattggggtaaggaagatgat
tccaatctgttaataggtatctacgaatatggctatggcagctgggaaatgataaaaatg
gatcctgatctcagtttgacacagaagattttacctgatgacccagataagaaaccgcag
gcaaagcagttgcagacccgtgcagattacctcattaaattactgaataaagaccttgca
agaaaagaagtgcaaagacttactggtgcaggcaattcaaagaggaagaaagcaagaagt
aagaagaatagagcaacaaagtctgcaaaaatgaaagaagaaataaaaagtgactcatca
ccaccctcagaaaaatcggatgatgatgtgtataatgaggatgagattgtttcagtgaaa
tgtccacataaaaaaataaaagcagaagaaaatgaagaaaagcctgagccagatattggt
ataaagatggaagctgtggaaaaaagagagacaagagaaaaagaaaataagaggcattca
aaaaaagagaaaaaagaaaaagaggataagaaagagttaaaaaatattaaagaaaagaga
gaaaacaaactaaaagaatccacacagaaagaaaaagaagtaaaggaagaaaaggcaaat
gaactcaaatctgaaaataaagaaaaaaataaaaaagtttcattgttggatattccagtt
catattactgcaactagtgaaacacttccaatatcagaagaatctgaagaactggatcag
aggacattcggtgtgtgcaaagaaagaatgaggcctgttaaagcagcattgaaacaattg
gatagaccagagaaaggcctttctgaaagggaacagctggagcatactagacagtgccta
atcaaaattggggaccacattactgaatgtctaaagcagtacacaaatcctgaacaaatt
aaacagtggagaaaaaacttgtggatttttgtctctaagtttacagaatttgatgccaga
aagctgcacaagctgtataaacatgcaatcaaaaaacgccaagaatctcagcagcacagt
gaccagaatattagcaacaacatgaatacacatgtaattagaaatccaggtgttgaaaga
ctgaaggagaatacaaaccatgatgacagtagcaggaacagttcttctgatagacatttg
tcacagtactatgatcatcataaggacaagcatcaggaagatgcttataataaaaatgac
tcgagaaaaaggtcccattcagctttcagcaatggaaaagaccacagagactgggatcac
tataaacatgacagcagatactatagtgatggtaaacatagaaagctggatgaccacagg
agcagagatcacaggtcaaacctggaaggaagtttaaaagacagtcggcctcattcaaat
caccgttcccattcagaccacaggatacattcagatcaccgttccacttcagagtatatc
catcataaatcttccagagattataggtaccactcagactggcaaatagaccacagagct
tctggtagtggcccaaggtcaccattagatcagaggtctccttatgggtcaagatctcct
ataggacacagatctccatttgaacactcatcagatcacaaaagtacacctgaacataca
tggagtagccggaaaacataa
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