Vidua chalybeata (village indigobird): 128783458
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Entry
128783458 CDS
T11587
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4 isoform X1
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcha03016
]
128783458 (LCMT2)
Enzymes [BR:
vcha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
128783458 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
128783458 (LCMT2)
Transfer RNA biogenesis [BR:
vcha03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
128783458 (LCMT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Beta-prop_FBX42
Beta-prop_TYW4
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
Kelch_HCF
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
128783458
NCBI-ProteinID:
XP_053790142
LinkDB
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Position
2:complement(33031..53145)
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AA seq
691 aa
AA seq
DB search
MLVRSGSAVSLSRQVQDTGGSSAVSKCSAAARGYIQDRFLRLLAGRRRRRAPLIHRGYYI
RARAVDHCVQDFLLKTQSLPRTQILSLGAGFDSLYFRLKDMGLLHHTVVYEVDFPNVACQ
KATLIKGIKELSALVGDTGGEGLGAITFSGDDYKLLGVDLSELSELERTLEEAGLNNEIP
TLFIAEVVLTYMENTRSAGFSSLAQRSDALIQWAAEHFPRACFLLYEQVHPEDPFGRVMQ
QHFRQLNTALHSLAQYPDCKAQQRRFLGKGWTECSVMDMNEFFTCCIPEDEQQRVQTLEP
FDEYEEWHLKCSHYFVLAASKGMEPSWTPLSPSVTVPGPVGMAGSVSAAVCARLSGIPGL
RRYGHHSVLIKPNVILTMGGFGEEDGQHCRVRNFHVLSKHAGHWEAVCVAQNIPDKRWGE
RLYHTVSCLSDTLALVVGGRTSPLSTGLGMLWLKFPKTCDASGPDDVAVELVSLQPAAEA
AALRWRHSTTEITFKGEQYLFVYGGRSALEPVLGDWHFLHAPELSYTAIAVEGPVPESRH
SHSACSWEGGVLIAGGLGAAEQPLGSVFLLRELEHGFQWQTIETHPPLVPRYSHTAHVHE
GKLLLVGGVWFHAPSVPGVTVIDLMTGLCLNYGINVEHLEWPLMLHNHSSVFLPNEKKLL
VIGGGGNCFSFGTHLNPEPVLLSLSSILTSH
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaggagcggcagcgccgtgtcattgtcccggcaggtccaggacaccggcggc
agcagcgccgtcagcaagtgctcggcggcagcgcggggctacatccaggaccggttcctg
cggcttctggcggggcggcggcggcggcgagcgccccttatccaccggggttattacatc
cgtgcccgtgctgtagatcactgtgttcaggacttcctgctgaagacacaaagcctaccc
aggacacagatcctatctttaggtgctggctttgattccttatacttccgtttgaaggat
atgggtcttctgcatcacactgtggtatatgaggtagatttcccaaatgtggcatgccaa
aaagctactctgatcaaaggaattaaagagttgtcagcactggtgggagacactggaggg
gaaggattaggagccattaccttttctggagatgattataaattactgggagtggattta
tcagagctgtctgagctggagagaaccctggaggaagcaggactgaacaatgaaatcccc
accctcttcatcgcagaggtggtgctcacctacatggagaacaccaggtcagctgggttc
tcctctcttgcccagaggtcagatgccttgattcagtgggcagcagagcatttccctcgg
gcgtgcttcctgctgtatgagcaggtgcacccagaggacccctttggacgcgtcatgcag
cagcatttcaggcagctgaacactgcactgcactcactggcacagtaccctgactgcaag
gctcagcagaggcgcttcctggggaagggctggactgagtgcagtgtcatggatatgaat
gagtttttcacctgttgtattccagaagatgagcagcaaagagtgcagactctggaacct
tttgatgagtatgaggaatggcatctgaaatgttctcattactttgtgttggctgcatca
aaggggatggaaccttcctggactccgttgtcacccagtgtaacagttcctggtcctgtt
gggatggcagggagtgtctctgcagcagtgtgtgcaaggctctcaggaattcctggcctg
agacgttacggtcaccactctgttcttataaagcccaacgtgattctcaccatgggaggc
tttggggaggaggatggacaacactgccgcgtgagaaatttccacgtgctgagtaagcat
gcaggccactgggaagctgtctgtgtggcacagaatattcctgataaaagatggggtgag
aggttgtaccatactgtgtcttgtctctcggacactctggctctggtggtaggaggacga
acatctccattgagtacaggcttgggaatgttgtggctgaagttccccaaaacctgtgat
gcttcaggcccagatgacgttgcagtggagcttgtaagcctgcagcctgctgctgaagca
gcagctttgcgttggagacacagcacaactgaaattacattcaaaggtgagcagtacctg
tttgtgtatggtggccgctctgctctggagcctgtgctcggggattggcatttcctgcac
gctccagaactctcctacactgcgattgctgttgagggtccagtcccagaaagccgccac
tctcacagtgcctgcagctgggaaggaggtgtgctgattgcaggaggtctgggagcagct
gagcagcccttgggttcagttttcctgctgagggagcttgaacatggctttcagtggcag
acaatagagacacaccctcctcttgtcccaaggtattcacatactgcacatgtgcatgaa
ggaaagcttctgctcgttggtggagtgtggtttcatgcaccctctgtgccaggtgtcact
gtcatcgacttaatgactggtctctgtttgaactatgggattaatgtggagcacctggag
tggccattaatgctacataatcatagcagtgtctttctgccaaatgaaaagaagctgttg
gttattggcggtggtggaaactgcttctcctttgggacacacttgaacccagagcctgtc
ttgctgagcctcagcagcatcctgaccagtcactga
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