Vidua chalybeata (village indigobird): 128783626
Help
Entry
128783626 CDS
T11587
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128783626 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128783626 (SPATA13)
Membrane trafficking [BR:
vcha04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128783626 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
128783626
NCBI-ProteinID:
XP_053790517
LinkDB
All DBs
Position
2:complement(90576820..90748195)
Genome browser
AA seq
1335 aa
AA seq
DB search
MKAFSTPSLAAPPEELSSPSRCDGKADQGAADEGEAARSAGGDSSVALSYPSLHLHAYSI
ESMTTFPNGCGNGTTVTCIVMDDKETQNQPTCASHNGGHSTSSSLEEEFQEDKLSPSKIM
RFFTTPRKRANSSSDRPRSLVLMGNSSTWNAFSSIRKMGSFKKLKSSVQQGTQTRECSDI
VNENSIGKHGSNGAVVRVQTNRYSYSGPVHDFQNAVDGLASDCSDVEESDESFLRNTHRS
RSIRRAYGAGRINLLDTDKVQSRHNCVRPTSPVIAEPKICEILVKDSENNRIIYWRSKSS
DNLNFLKKSSFKRKSTSNLADLKVANEKQMPARTVSVASADSDKSGGNSERRSKRWKSPI
RAKDFDRVLKLVSNVTDVARKKDGPKNMAPSSSELSQRMRSNSRLHDDYSRRVSSSTDHD
RKRCASSVSSPDSSLPGTPCLQSPVIAQDKKAEMNVVVTEDKSLRTSSDIPDSDCFSPTL
DDISPFPNEVFYSDSDEPKATQQCTDEAENLHIPVRPTTPKPQSPTAGKVKCTMNFQYPN
HHSTLSLSSSESEERVELPGLKLGRNPVCFQDSVHTVYYDDGNEDSGISSHSQLSLNLAS
GTEEKKEEVVSDDHWKKSTSQDEEKADSQKVTPRKWGSGKRSRPRPLSDYGQMSIRSFSI
PEDAVAVESQEIDCTDGENQPGLASVGSVSQSSTVGYHRGRKRRPISVIGGVNFYGDDQV
EERENLLTQPVARPPVPAHKVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNVAA
DGGTESSALVDDNGSEEDYSYEELCQAAPRYLQPGGEQLAINELISDGTVVYAEALWDHV
TMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCSNIQD
EEQDSDISKHRQKIAENRDQMRTNVIQEIMKTERVYIKHLKDICEGYIRQCRKHTGMFTM
AQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHP
SACIELSRLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQ
EHSDYSNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHS
GELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDETEIVDTEDGKDKD
FNINVKNAFKIINRATEEVHLFCAKKQEDKKRWMEACESERRRVQEDKEMGMEISENQKK
QAMQNARKSRQGKIKGVSYNGCPVPPPHQTLHPLHQRHITVPTSVPQQQVFALAEPKRKP
SLFWHTFNKLTPFKK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccttcagtactcccagcttggcagcaccgcctgaggagctcagctcacccagt
agatgtgacggcaaggcagaccaaggtgcagcagatgaaggggaggcagcgaggtcagct
ggtggagacagcagtgttgctttgagctaccccagcctccacctccatgcctacagcatc
gagagcatgacaacatttccgaatggctgtggaaatggcaccaccgttacttgtatagtt
atggatgataaagagacccaaaaccagcctacctgtgctagtcataatgggggacacagc
accagcagcagtcttgaggaggaatttcaagaggataagctcagcccttccaaaatcatg
cgctttttcaccacccctcggaaacgggctaattccagctctgacaggcctcgttctctg
gttctgatgggcaactcatccacgtggaatgccttttcttctatcagaaagatgggatct
ttcaagaagttgaaatcttcagttcagcaaggaactcaaacaagggaatgctcagacatc
gtaaatgagaacagcataggcaaacatggttcaaatggagcagtggtgcgagttcagact
aacaggtattcctattcgggacctgtacatgatttccagaatgcagtggatggtttagct
tctgactgctctgatgtggaggagagcgatgagtccttcctgaggaacactcatcgctca
cgcagcatcaggcgggcttatggtgctggccgcataaacttgttagacacagataaagtt
cagagtcgtcacaactgtgttaggccaacatcacctgtcattgcagagccaaagatctgt
gaaattttggtgaaagactccgaaaacaacaggatcatttattggagaagcaaaagttca
gataatttgaactttctgaagaaaagttcattcaaacggaagtccacctcaaaccttgct
gatctgaaggttgcaaatgaaaaacagatgccagcaaggactgtgagcgttgcttctgct
gactctgacaaaagtggtggaaactctgagaggcgatccaagcgatggaagagccctatc
agagcaaaggattttgaccgagttttgaaacttgtcagtaatgttacagatgttgctagg
aagaaggatggccccaagaatatggctccttcttccagtgagctgtcccagagaatgagg
tcaaacagcaggctgcacgatgactactcccgtagagtttccagcagcacggatcatgac
aggaagagatgtgcctcctcggtatccagtccagactcttccttgccaggaacaccttgc
ctgcaaagccctgtgattgctcaggataaaaaggctgaaatgaatgtagttgtcactgag
gataaaagcctcaggacatcatcagatatcccagactctgattgcttttcacctactctg
gacgacattagtccatttcccaatgaagtcttttattcggactcagatgaaccaaaagct
actcagcagtgtacagatgaagctgaaaaccttcacattccggtcaggccaactactcca
aagcctcaaagtccaactgcaggaaaggtcaagtgcactatgaatttccagtatccaaac
catcacagcacattgtcactgagctcatcagagagcgaggagagagttgagctaccaggg
ctgaagctgggcaggaatcctgtttgcttccaggactcagtgcatactgtgtattatgat
gatggaaatgaagacagtggcataagcagccactctcagctgagcctcaatttagcctct
ggtactgaagagaaaaaggaagaggttgtttctgatgaccactggaagaagtccacatcc
caggatgaagaaaaggcagactcacaaaaggtcacacccaggaaatggggctctggaaaa
agatcccggcccagacctctctcagactatggccaaatgtcgatccgaagtttctctata
ccagaagatgcagttgcagtggagtctcaggagatagactgcacagatggagaaaatcag
ccaggactggcatccgttgggtctgtgagccaaagcagtactgtaggctaccacagaggg
agaaaaagaagacccatctccgtaataggtggggtcaatttctatggagacgatcaagta
gaagagagagaaaatctgctgacacaacctgtggcacggccacctgttccagcacacaag
gtgcccccgtacaaggctgtttcagccaggttccggccactcaccttctcacaaagtacc
cccatcggtctggaccgggtgggacggaggcggcagatgagaacatctaatgttgctgca
gatggtgggactgaatcttcagctttagtggatgacaatggcagtgaggaagattacagc
tacgaggagctctgccaagctgctcccaggtacctgcagcccggaggggaacagctagca
attaatgagctgataagcgatggcaccgtcgtctatgcagaggctctctgggaccatgtc
actatggatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagct
tccaacaaagactggtggtggggaagaaatgaggacaaggaggcctggtttccagctagc
tttgtcaggctgcgagttaatcaggaagaagtgccagaaaattgtagtaatatccaggat
gaagaacaagattcagatattagcaagcatcgccagaaaatagctgaaaacagggatcag
atgagaaccaacgttatacaggaaattatgaaaacagaacgagtctatatcaagcatctc
aaggacatctgtgagggttacattcggcagtgtcgcaaacatacaggaatgttcaccatg
gctcagttaagcaccatttttggtaatattgaagatatttacaagttccaaaggaagttt
ctgaaggatcttgagaaacagtacaacaaagaggaacctcatctaagtgaaatagggtca
tgttttcttcaacatcaagaaggctttgctatttattcggagtattgtaacaatcatccc
agtgcctgcattgagctctccagactgatgaagcagggcaaataccgccatttcttcgag
gcctgtcgcttgcttcagcagatgattgacattgccattgatggttttcttctcacgcct
gttcagaaaatctgcaaatatcctttgcagcttgcagaattgctcaaatacaccactcag
gagcacagtgattatagcaacataaaagctgcatatgaggccatgaagaacgtggcatgc
ctgatcaacgagcgaaaacggagactagaaagcatagacaagattgcccgttggcaagtc
tctatcgtagactgggagggaccagatgtgttagccagaagctcagaactgatccactca
ggagaactgaccaaaatatcaaaacaaggcaaaagccagcagaggactttcttccttttt
gaccatcagcttgtgttctgtaagaaggacttgctgagaagggacatcttgtactacaag
gatcgtattgacatggatgagacagaaattgtagacaccgaagatggcaaagacaaagat
tttaacatcaatgtcaagaatgcttttaagataataaacagagcaacagaagaggttcat
ttgttctgtgcaaaaaaacaggaggataaaaagagatggatggaggcatgtgaaagtgaa
aggagaagagttcaagaagacaaggaaatgggtatggaaatctcagaaaaccagaagaag
caagccatgcagaatgcccgtaagtcaaggcaaggaaaaattaaaggtgtgagctataat
gggtgtcctgtgcctcctccacatcaaacccttcatccccttcaccagcgacacatcacc
gtgcctaccagcgtcccacagcagcaggtctttgccctggcagaacccaagcggaagcca
tcccttttctggcataccttcaacaaactcactccctttaaaaagtga
DBGET
integrated database retrieval system
