Vidua chalybeata (village indigobird): 128784073
Help
Entry
128784073 CDS
T11587
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcha03037
]
128784073 (IFT88)
Cilium and associated proteins [BR:
vcha03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
128784073 (IFT88)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_14
TPR_19
TPR_8
TPR_16
TPR_6
CFAP70_TPR_C
ANAPC3
RMD1-3
TPR_11
TPR_10
ARM_TT21_4th
TPR_17
TPR_9
DUF6340
TPR-S
CNOT10_TPR
TPR_CcmH_CycH
TPR_15
TPR_YpiA_C
ARM_TT21_5th
ARM_TT21_C
DUF2989
TPR_21
HAT_PRP39_C
TPR_Psidin_N
NBD_SMAX1
NatA_aux_su
CFAP70_mid_TPR
ARM_TT21_2nd
TTC22_N
Motif
Other DBs
NCBI-GeneID:
128784073
NCBI-ProteinID:
XP_053791318
LinkDB
All DBs
Position
2:89159515..89203872
Genome browser
AA seq
816 aa
AA seq
DB search
MMQNVHLAPENNEDDLYSGYNDYNPMFDTEDLENDVAFQQAARTSHGRRPSVTAKIPGTS
SPRPLATGFGSKATLTSSMGRPMTGTIQDGVSRPMTAVQAAGYTKAAVRGSSFDPLGQAR
GPASPLEKKTSDSLEEKMRQLEKKVNELVEESCVANSCGDLKLALEKAKEAGRQERELLR
QREQITPPESINLDLTYTVLLNLASQYVANEMYAEALTTYQVIVKNKMFSNGGILKVNIG
NIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYVDAISSFEEIMS
ISPNLKAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEDKYISLNDDLHTNLLIEAI
KTDSLSQIQRDRKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELANDLEI
NKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAVNS
DRYNPAALTNKGNTVFANGDCEKAAEFYKEALRNDSLCTEALYNLGLAYKKLNRIDEALD
CFLKLHAILPNSAQVLYQLASIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDIE
GDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYITKLKKAEKL
KEIREQRIKSGREGSARSRKEGSGDSGGTKGERLSAKLKALPGTSEPYESSSSKEIDASY
ADPLGPQPERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctggctcctgagaataatgaagatgatctctattctggctac
aatgattataatcccatgttcgacactgaggatttagaaaatgatgtagcttttcaacag
gcagcaagaacaagtcatggaagaagaccctctgtgactgccaaaattcctggtacatca
agtccaagacctctagctactggatttgggtcaaaggcaactttaacttcatctatggga
agacctatgacaggaactatacaggatggggtttctcgaccaatgacagcagtgcaagct
gcaggttacactaaagcagctgtgagaggttcttcatttgatccacttggccaagcaaga
ggtcctgcttcacctctggaaaagaaaacttcagacagtttagaagagaagatgaggcag
ttggaaaaaaaagtgaatgaactggttgaagaaagctgtgttgccaatagctgtggagac
ttgaaattggctctggagaaagcaaaagaagctggaagacaggaaagagaattgttgagg
caacgtgaacaaatcactcctccagaaagtatcaacttagacctcacttacacagttctt
ctcaatctggccagtcagtatgttgctaatgaaatgtatgctgaagcgctgactacttac
caagttatagtgaagaataagatgtttagcaatggaggtatactgaaggtaaatattgga
aatatatatttaaaacaacggaactattccaaagctatcaaattctaccgtatggctcta
gaccagattactagttcccacaaacagatgaggataaaaataatggaaaatattggagtt
gcttttattaaaactggccagtatgttgatgccatttcttcatttgaagaaataatgagc
atatccccaaacctgaaggcaggcttcaacctgatcctatgttactttgctattggaaat
ggtgaacagatgaagaaagccttcaaaaacctcattgaagttcccttggaagtggattat
gaagacaaatacatttcattaaatgatgatctacatacgaatctactgattgaagccatt
aaaactgacagtttaagtcaaatacaacgtgacaggaagtccttggcagaggaatacatc
atgacagctgctaaactcattgcaccggcaatcgagacatcttttgcagtaggctatgac
tggtgtgttgatgcggtgaaagcttcccactatgtagaattagccaatgatctggaaata
aataaagccactacttacttgaggcaacagaattttaaccaggcactggagactttgaaa
atgtttgaaaaaaaggatagcagagtaaagagtgcagctgcaacaaacctttcattcctt
tattatttggggaatgaattggaacaagcaactaactatgcagatttagcagtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactgtttttgcaaatggagac
tgtgaaaaagcagctgaattttataaggaagctctcaggaatgattccttatgcactgaa
gcactttataatcttggtttagcttacaagaagttaaacaggatagatgaagctttggat
tgttttctgaaactccatgcaatccttccaaatagtgcccaagtcctttaccagctagca
agcatataccagatcatggaagatcccaatcaagccatagagtggctgctgcagttgatc
agtgtagtaccaactgatccacatgtactttcaaagctagggaatttatatgatattgaa
ggtgataaatcccaagcttttcattattactgtgagtcgtaccggtatttcccttccaac
attgaggtcattgagtggcttggagcatattacattgacacccagttctgtgaaaaagcc
attgagtactttgaaagggcagcacttattctgccaacacaagtgaagtggcagctgatg
gttgccagttgctacagaagaagcggcaactaccagaaagctctggagaaatacaaagtc
attcacagaaaattcccagagaatgttgaatgcctccgatttttagttcgtctctgcaca
gacatggggctgaaagaagtccaggaatatataacaaaactcaagaaagcagaaaaatta
aaagaaatcagagagcagcgcattaaatctggcagagagggcagtgcacgtagccgcaaa
gagggaagtggtgatagtggtggtaccaaaggggaaagactgagtgccaaactaaaagct
ctacctggaacaagtgaaccctatgaaagtagcagcagtaaagaaatagatgcctcctac
gcagatccacttggcccacaaccagaaagaccaaaaacagcagcaaggaaaagaacagag
gaagatgattttgctgacgaagaactaggagaggatctgcttccagaatag
DBGET
integrated database retrieval system
