Vidua chalybeata (village indigobird): 128784232
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Entry
128784232 CDS
T11587
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128784232 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcha03019
]
128784232 (EXOSC8)
Messenger RNA biogenesis [BR:
vcha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128784232 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Modigliani
Motif
Other DBs
NCBI-GeneID:
128784232
NCBI-ProteinID:
XP_053791606
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All DBs
Position
2:95569402..95579057
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AA seq
294 aa
AA seq
DB search
MAAAAAGPPAEAAGRAGRQGAPHPGRRRHRHGGSVQKENCRPDGRELGEFRTTTVNIGSI
TTADGSALVKLGNTTVICGVKAELAAPAVDSANKGYIVPNVELPSLCAERFRSGPPGEEA
QAASQFIADVIENSQMIVKEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKN
VQLPLVTINEETGLSEVNLKQKNPLFIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTV
TIVTDEEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIKSITPK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgccgccggtccgcccgcggaggctgccgggagagcgggccgccagggg
gcgccacatccggggcggagacggcaccgccatggcggcagcgttcaaaaggagaactgt
cggcctgatggaagagagttaggtgaatttcggacaaccactgtcaacataggttcaatt
acaactgcagatggttctgccctggtgaagttaggaaataccacagtgatttgcggagta
aaagcggaacttgctgcacctgcagtggattctgctaataagggatatattgttccaaat
gtggagctgccatccctctgtgcagagaggtttcgctctggaccacctggggaagaggct
caagcagcgagccagttcattgcagatgtgattgaaaattcacagatgatagtgaaagaa
gatctgtgtattgccaatggcaagcttgcatgggttttatactgtgatatcatatgtctg
gactatgatggaaaccttctggatgccagtgtctttgctttgttggcagcattaaaaaat
gtgcaattgccgttggttacgataaacgaagaaactggtttatcagaagttaatttaaaa
cagaagaatcctttgtttatcagaaagcatccggttgccacatcatttgctatatttgat
gacacgctactcattgttgatccaactgctgaagaagaagatttagcaactggaacagta
accattgtaactgatgaagaaggcagactgtgttctgtccataaaccaggtggaagtcct
cttacaggagccaagcttcaggactgtatcaccagagcaattacaagacacaaagaagta
aagaagctgatagacaaagtaataaaaagtataacacccaagtga
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