Vidua chalybeata (village indigobird): 128784296
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Entry
128784296 CDS
T11587
Symbol
BOC
Name
(RefSeq) brother of CDO isoform X1
KO
K20020
brother of CDO
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
128784296 (BOC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
vcha04515
]
128784296 (BOC)
Cell adhesion molecules [BR:
vcha04515
]
Immunoglobulin superfamily
Other
128784296 (BOC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
ISET-FN3_linker
Ig_VEGFR-1-like_5th
V-set
Pur_ac_phosph_N
C2-set_2
Fn3_ROS1
Ig_SEMA-3_4_7A
Ig_4
Fn3_VIN3
Ig_5
C1-set
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
128784296
NCBI-ProteinID:
XP_053791738
LinkDB
All DBs
Position
2:67255904..67310228
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AA seq
1157 aa
AA seq
DB search
MCVCVCVCVCVVNSPQIRPGSSQLLEESTATASPEAAYGTLPWAPQVTLHGMAMTRGRKR
PMSPIPCLVLAAASCFAKLSESLQVTVQPASIVQKLGGPVSLGCVVDPPRVNLTWRLNGK
ELAGSDEVLGIHVERGKLIITALNNRTVGRYQCIARVPEGVIASVPAVVTLANLKDFKFD
GPHVIEVDEGNTAVIACDLPESHPKAQVRYSVKQEWLEASRDNYLIMPSGNLQIVNASQE
DEGTYKCAAYNPVTQEVKTSVSSERLRVRRSTAEAARIIYPPEAQTIIVTKGQSLILECV
ASGIPPPRVTWAKDGSGVSAYNKTRFLLSNLLIDPMSEEDSGTYSCTADNGVGEPGAAFI
FYNVQVFEPPEVTMELSQQIIPWGQSAKFTCKVRGNPQPSVMWLRNAVPLSGSHRLRLSR
RALRLLSVGPEDEGIYQCMAENEVGSAQAMVQLRTARPGAPLNPGRDAQLDLAQPPTPPS
RDSTLKLPLDKAGLPKPGTTPLAASPQCAANKELVPPAEAPIILSSPRTSKTDSYDLVWR
PRPDSRAPILYYVVKHRKQVTNTSDSWAVRDVPASQHRLTLTRLDPGSLYEVEMAAHNCA
GEGQTAMVTFRTGRRPKPEIVASKEQQIQRDDPGTSTQSSNQADNSRLSPPEAPDRPTIS
MASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKLGDWVLATSDIPPSRLSVEIPGLEKGM
SYKFRVRALNILGESEPSAASRPYVVSGYNNRVYERPVAGPYITFTDAINETTIMLKWMY
IPASNNNTPIHGFYIYYRPTDSDNDSDYKKDVVEGDRYWHSISHLQPETSYDIKMQCFNE
GGESEFSNVMICETKARKSLGLPGRLPPSTVPPQQRPPLSGGHSGLGTGAMVARSSDLPY
LIVGIVLGSIVLLIVAFIPFCLWRAWSKQKQTIDMSFPGAGLLVSSCQYTMVPLRGISAP
RANGHPFVNGQPYASRAHLNGICTSAGVGYTSTKPQDYSPNEMPQSHEETNALLQARVLQ
NGNAQQDYQPSRLPSSRTEDSSFLYSLPDDSTHQLLQPQDDCPHLQEHFVGLHHPVMGSK
VGGPSLDARRDTLFHQGSPCCLGLVPVEEVERLDCCQSRGDLRAQNPVITSLGQDLPRHL
NSSPPPLRPSETHPPTS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagtgaattccccgcagatccggcctgga
agttcccagctcctggaggaatccactgccactgcatcccctgaggcagcttatgggacc
cttccctgggcgccccaggtcacactgcatgggatggcaatgacacgtggaaggaagagg
cccatgtcccccatcccttgcctcgtgcttgcggctgccagctgttttgccaaactaagt
gaatctctgcaggtcacagtgcaacctgcttctattgtccaaaaacttggaggcccagtc
agcctgggctgtgtggtggaccccccccgagtgaacctcacctggagactgaacgggaag
gagctggctggatcagatgaggtgctgggcatccacgtggagcgagggaagctcatcatc
acagctctcaacaaccgcactgtggggcgctaccagtgcatcgctcgtgtgcctgaagga
gtcattgccagtgtccctgcagtggtcaccttagctaatctcaaagatttcaagtttgac
ggcccgcatgtgatcgaggtggatgaagggaacacagccgtgattgcctgcgacctgccc
gaaagtcatcccaaggctcaggtccgctacagtgtgaagcaggagtggctggaggcctca
cgagacaattatcttattatgccatctggaaaccttcagatcgttaatgccagccaggag
gatgaggggacttataaatgtgctgcctacaaccctgtgacacaggaggtgaaaacttcc
gtttccagtgagaggctccgtgtgagacgctccacagcagaggcagcccggataatctac
cctcctgaggctcagaccatcattgtcaccaagggccagagcctcattctggagtgcgtg
gccagcgggatccccccgccacgggtcacctgggccaaggatggctccggcgtctctgcc
tacaacaagacacgcttcctgctcagcaacctcctgatcgaccccatgagcgaggaggac
tcgggcacctacagctgcactgctgacaatggcgttggggagcccggggccgcgttcatc
ttctacaacgtgcaggtgtttgaacccccggaggtcaccatggagctgtcccagcagatc
attccctggggccagagcgccaagttcacgtgcaaggtgcgagggaacccgcagccctcg
gtgatgtggctgcgcaacgcggtgccactgtcgggcagccaccggctgcggctgtcacgc
cgggcactgcggctgctcagcgtggggcccgaggacgagggcatctaccagtgcatggcc
gagaacgaggtgggcagcgcccaagccatggtgcagctgaggacagcccgcccaggagct
ccactcaaccctgggcgagatgcccagctggacttggctcaacctccaacaccaccttcc
agggacagcaccttaaagctgcccttggataaagctggactgcccaagcctgggacaacc
cctctagcagcatctccacagtgtgcagccaacaaggagctggtgcctccagccgaagcc
cccatcatcctcagttctccacggacatccaagacagacagctacgacctggtgtggaga
ccccggcctgatagcagagcccccatcctctattacgtggtgaagcatcgcaagcaggtc
accaacacctcagacagctgggctgtgagggatgtcccagcctcgcagcaccgcctgacc
ctcaccaggctggaccctgggagcctctacgaggtggagatggctgctcacaactgtgct
ggcgagggacagacggccatggtgaccttccgcactgggcggcgcccaaaaccagagatt
gttgccagcaaagagcagcagatccagagggatgacccaggcacgagcactcagagcagt
aaccaggccgacaacagccgtctgtcccctccagaggcaccagatcgtccaaccatctcc
atggcctcagagacgtctgtgtacgtgacctggatcccccgtgggaatggtgggttcccc
atccagtctttccgcgtggagtataagaaattgaagaagttgggagactgggtcctggcc
accagtgacattcctccctctcgcctctctgtggaaatcccaggcctggagaaaggcatg
tcctataaattccgcgtgcgggcactgaacatcctgggagagagcgagcccagcgcggcg
tctcggccgtacgtggtgtctgggtacaacaaccgcgtctacgagcgccccgtggctggg
ccctacatcactttcacagatgccatcaacgagaccaccatcatgctcaagtggatgtac
atcccagccagcaacaacaacacccccatccatggattttacatctactaccgccccact
gacagtgacaatgacagtgactacaagaaggacgtggtagaaggagatcggtactggcac
tccatcagccacctgcagccagagacctcgtatgacattaagatgcagtgcttcaacgag
ggcggtgaaagcgagttcagcaacgtgatgatctgtgaaaccaaagctcggaagtctctt
gggttgccaggtcgtcttccaccctccacagtgccccctcagcagcgtcccccactcagt
ggtgggcacagtggcctggggactggagccatggtggcccgttccagcgacttgccgtac
ttgattgtaggcattgtgctgggatccattgtactcctcatcgtggctttcatccccttt
tgcctttggagagcttggtccaagcagaagcaaaccattgacatgagcttcccaggagct
gggctgctggtgtcatcctgccagtacaccatggtgcctctgagaggcatctctgctcct
cgtgccaatggacatccctttgttaatgggcagccctatgccagcagggcacatctgaat
ggcatctgcacctctgcaggagtggggtacacaagcaccaagccccaagattacagcccc
aatgaaatgccacagtcacacgaggagaccaatgccttgctgcaggcaagagtgctgcag
aatgggaatgcccagcaagactaccagccctccagattgcccagctccagaacagaagac
agctctttcctgtacagtctcccagatgactccactcaccagcttcttcagccacaagat
gactgtcctcaccttcaagagcactttgttggcctccatcatcctgtgatgggaagcaaa
gtgggaggccctagcctggatgctcgacgggataccctcttccaccaaggaagcccttgc
tgcttaggcctagtgccagttgaagaggtagaaagactagactgctgccagtccagagga
gatctccgtgcccagaatccggtgatcacatctttgggtcaggacctaccaagacatctg
aacagcagccctccaccactgagaccctcagagactcatcctcccaccagctag
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