Vidua chalybeata (village indigobird): 128784558
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Entry
128784558 CDS
T11587
Symbol
CD47
Name
(RefSeq) leukocyte surface antigen CD47 isoform X1
KO
K06266
CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04148
Efferocytosis
vcha04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128784558 (CD47)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
128784558 (CD47)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcha02000
]
128784558 (CD47)
04515 Cell adhesion molecules [BR:
vcha04515
]
128784558 (CD47)
04090 CD molecules [BR:
vcha04090
]
128784558 (CD47)
Transporters [BR:
vcha02000
]
Other transporters
Pores ion channels [TC:
1
]
128784558 (CD47)
Cell adhesion molecules [BR:
vcha04515
]
Immunoglobulin superfamily
Other
128784558 (CD47)
CD molecules [BR:
vcha04090
]
Proteins
128784558 (CD47)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CD47
V-set_CD47
Ig_3
Motif
Other DBs
NCBI-GeneID:
128784558
NCBI-ProteinID:
XP_053792256
LinkDB
All DBs
Position
2:complement(63143347..63173687)
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AA seq
330 aa
AA seq
DB search
MWLLAASVLLGALRAGSAQLSLSGTSIVEKNDCNKTVVLPCYVTDLKQNNENAMSVTWKK
QGVTIFFYHGGNKKFNIDPSFSSARFLSQVELIKGVASLVLDSAQATVGNYSCKVTESNS
EGEIKMELKNSSVVSCGDETPEEKCGSWFLLAERVGIVLLMCLLVVLCIVQLSVIGLKYE
IESQRKVCTIVALVIFAVVAGVGAALFIPDGYTVQNQAGLGLIVIPAVILVPLQYVMFGI
VFDSLLQATLALIGLKLLGFIIAVVGFALCVPACPPLHASVLIAGLAIMAFASLCSLPYV
FFMGSRMKDHPRPGKAVEEPLNDAKGVMLE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgctggccgcctccgtgctgctcggcgccctgcgcgctggttctgcccagttg
tcactttctgggacaagtattgtggaaaaaaatgactgtaataaaactgtagttttacct
tgttatgtgactgacctaaagcagaacaatgaaaatgccatgtctgttacatggaaaaaa
caaggagttacaatttttttttaccatggaggaaacaagaagtttaacattgatccctca
ttttcatctgcaagatttttatcccaggtggaattaatcaagggtgtggcctcgctggtg
cttgacagtgcccaagcaactgtgggaaattacagctgtaaagtaacagaatcaaacagc
gaaggagaaataaaaatggaacttaaaaacagctcagttgtcagttgcggtgacgaaacg
ccagaggaaaaatgtggatcctggttccttctagcggaaagggttggcatcgtattattg
atgtgcttacttgttgttttatgtatagttcagttaagtgttattggattaaaatatgaa
attgaatctcagaggaaagtgtgcactattgtagcacttgtcatctttgcagttgtagct
ggtgtaggcgctgctctttttatcccagatggctatactgtacagaatcaggctggtctt
ggcctaattgtaatccctgctgtgattttggtacctcttcagtacgtcatgtttggaatt
gtttttgacagtctgctgcaggcaacattggctctgataggtttgaaacttcttgggttt
ataattgctgtggttggttttgcactgtgtgtcccagcctgccctccgttacatgcatct
gttctgattgctggcttagctattatggcttttgcaagtttgtgtagtctgccttacgtg
ttttttatgggttccagaatgaaagatcatcctcgtccagggaaagctgtagaagaacca
ctaaatgatgcaaaaggagtgatgttagaatga
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