Vidua chalybeata (village indigobird): 128784967
Help
Entry
128784967 CDS
T11587
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03250
Viral life cycle - HIV-1
vcha03272
Virion - Hepatitis viruses
vcha04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128784967 (PDCD6IP)
03272 Virion - Hepatitis viruses
128784967 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128784967 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128784967 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vcha04147
]
128784967 (PDCD6IP)
Membrane trafficking [BR:
vcha04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
128784967 (PDCD6IP)
Exosome [BR:
vcha04147
]
Exosomal proteins
Proteins found in most exosomes
128784967 (PDCD6IP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
128784967
NCBI-ProteinID:
XP_053792913
UniProt:
A0A851KB08
LinkDB
All DBs
Position
1:complement(49172029..49203127)
Genome browser
AA seq
878 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPGAEAQAEHCRAAEELSRLRKSALGRPLDKH
ESALETLLRYYDQLCSVEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDGIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALAAAKKDNDFIYHDRVPDLKDLESIGKASLVKSTPVVVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQS
ILNKSKSVIEQGGIQTVDQLIKDLPELLQRNKEILDESLRLLDEEEATDNDLRTKFKERW
QRTPSNELYKPLRAEGANYHNILNKAMQADGQVKERYQTHRDTIALLCKPEAELNAAIPS
ANPAKTLQGNEVVNVLRTLLASLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSYTQKVQESLKKQEEILKNIQNAHQDFSKMKQSNNESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIIFARKTERDELLKDLQQSIARE
PSAPSIPLPTYQTTPAAGSKPAASPAPTPAPRTMVGTKPQPPARPPPPVISAASSSSSAL
APSGTAAAPAAAPAPTPGASAPAASTAPSQAQGPPYPTYPGYPGYCQMPMPMGYNPYMYG
QYNLPYAPSPVYQTPGQPPYPPPQQPGYPFPQQPYYQQ
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctcagtgcagctgaaaaaggcttcggaggtggacctggccaagccg
ctgtgcaagttcattcagcagagctacccgggcgccgaggcgcaggccgagcactgccgc
gccgccgaggagctcagcaggctccgcaagagcgcgctcggccgcccgctcgacaagcac
gagagcgcgctggagacccttctcagatactatgatcagctgtgttcagttgaaccaaag
tttccattctctgaaaatcaggtctgtgtaacatttacgtggaaagatgcttttgataaa
ggatcactttttggaggatctgccaagttggctctggcaagtttgggatatgagaagacc
tgtgttttgttcaactgtggagcattggcaagccagattgcagcagaacagaatctggat
aatgatgaaggactaaaagctgcagctaagcactatcagtttgctagtggtgcttttcaa
cacattaaagacacagttttgtcagccttgaatcgagaacctacagtggacatctctcca
gacacagttggaactctcagtcttattatgctggctcaagcccaggaagtcttttttttg
aaagcaacaagagataaaatgaaagatggtatcatagctaaactagcaaatcaagctgca
gattactatggtgatgcttacaaacagtgtcaatataaagatactttgcccaagtatttt
tatttccaggaggtgtttcctgttctggctgcaaagcactgcattatgcaggccaatgca
gaatatcatcaatctatcctggcaaaacaacagaagaaatttggtgaagaaattgggagg
ttacagcatgcagcagatttggtgaaaacggtggcatctcgctatgatgaatatataaac
gttaaagatctggttgacaaaatcaaccgtgcacttgcagctgccaaaaaagacaacgac
ttcatttaccatgaccgggtccctgacctgaaagatttggagtccattggaaaagccagt
cttgtgaagtctactccagttgttgttccactcagtcagaaattcactgacctgtttgag
aagatggttccattgcaagtgcaacaatctgtgagtgtttataaccagaggaaggcagat
ctggtaaacaggtcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttg
gcttcccttaatcttcctgctgctattgaagacgtgtctggtgataccgttcctcagtct
attttgaacaagtctaagtctgtgattgagcaggggggaattcagactgttgatcagctg
atcaaagatctgcccgaactgctgcaaaggaacaaagaaattctagacgaatctctgaga
ttattagatgaagaagaagctacagataatgacctgcgaacaaaattcaaagaacgctgg
cagagaacaccgtccaatgaactctataagcctctgagagcagagggagccaattaccat
aatattttgaataaagctatgcaagcagatgggcaggtgaaggagcgctatcagactcac
cgggatacaattgcacttctgtgtaagccagaggcagaactcaacgcagccataccttct
gccaacccagcaaaaacactacagggaaatgaggttgttaatgtcttaagaactttgctg
gccagtctggatgaagttaagaaggagagagaacaactggaaaatgacctgaaatctgtg
aattttgacatgacaagcaaattcctgactgcacttgcgcaggatggtgctataaatgag
gaggctatctctgtgactgagttggacagaatttatggaagttacacacagaaagtgcag
gagtccttaaaaaagcaggaagaaattctcaaaaacatccagaacgcgcatcaggatttt
tcaaagatgaaacaatcaaacaatgaatctaatttaagagaagaagtcttgaagaactta
gctgtagcaaatgacaactttgtggaacttgtagccaatttaaaagaaggcacaaagttt
tacaatgagctgacagaaatcctgctgaaattccagaacaagtgcagtgacattatcttt
gctcgcaagactgaaagagatgaactgctaaaagatttgcagcaaagcattgctagggag
cccagcgctccctccattccgctgcctacgtatcagaccacgccagcagcaggaagtaag
ccagcagcatcgcctgctcccactccagccccgagaaccatggtggggactaaaccacag
ccaccagcaaggccaccaccaccagtgatttctgcagcaagcagttcctcttctgcatta
gcgccctctggaacagctgctgctcctgctgctgctccagctcctactccaggagccagt
gcacctgcagcaagcactgcaccttcacaggcacagggaccaccttacccaacttatccc
ggttacccagggtattgccagatgccaatgccaatgggctataatccatacatgtatggt
cagtataatctgccatatgcaccctcacctgtgtatcaaactcctggacagccaccatat
ccaccacctcaacagcctggatacccttttcctcaacagccttattatcagcaataa
DBGET
integrated database retrieval system
