Vidua chalybeata (village indigobird): 128785518
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Entry
128785518 CDS
T11587
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcha03037
]
128785518 (NPHP1)
Cilium and associated proteins [BR:
vcha03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
128785518 (NPHP1)
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GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
128785518
NCBI-ProteinID:
XP_053794169
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Position
3:complement(38770542..38782970)
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AA seq
734 aa
AA seq
DB search
MRGRFHSSGLPGPGLGHGALPAPPRVRHPAAPGLSRCPVTMSERRARGPLQRVQRRNREL
RAQVEALRAESAAAAPGQREALRLRCTQLKELVEENTNALHGLKKSDEPAPVGNYSQRKE
EEEKLLLRLSQQLQKLLLVLDQDNVTKNYPGGEEHQKGPHAEGGNEEEEESEDEESEEED
TEEEEDEEKLLDDPNVRECVAVGNFDAQQEGDLTFLKGEILLIHNKKADGWWVAENSKGE
RGLVPRTYLAVPKEEEESQEESEEHTEVVDETADGTEIKRRTDSHWSAVRAIIENDTVEV
LTTTGAVPAGFRPSMLFHLLEEGEEFRASYYLQPKLTPSQLAFKDLVWNSERNTIHPRPT
RVSLIVTLCSCKMIPLPGTGVRVLSHHVRLCLFDGSRVLSNIHTVRAMWLPKNPQTWTFS
PRVMGILPSLLDGDSFVRCNSLSSDTGILFELGITYKCNSTGERGELSCGWTFLKLFTSS
GIPVPSKMYELVLSGGTPYEKGIEVDPSISRRGSGGFQQFMSLRKQPVLLVKVKSPSVHS
KDILNFLPETLVGGMCYIHLLVFYRQILGDALLKDRMSMQSTGEHWRKIRLVRGMTPARS
PFDLICNPVLATFPQLLDQPDLMDALRSAWADKERTLKRIEKRDQEFLKSAFVLVYHDSV
FPLLCSTFLPSYRWAEEEVELSRWKVIHDFLKRSREKDGALEYLLSSENIHKAFDISELA
YDFLGEVRGKSPGE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggaggtttcacagctccgggctgccggggccgggtctggggcacggagcgctg
ccggccccgccccgggtccgtcatccggcggcgccggggctgtcccgttgcccggtgacg
atgtcggagcggcgggcgcgggggccgctgcagcgggtgcagcgccggaaccgggagctg
cgggcgcaggtggaggcgctgagggcggagagcgcggctgcagcccccgggcagcgggag
gcccttcggttgagatgtacacagctgaaggaattggtggaagagaacacaaacgctctc
catggtttgaaaaaatctgatgagcctgcgccagtggggaattacagccagaggaaggaa
gaggaagaaaagctgttgctaagactttcccagcagctgcagaaactccttcttgtcttg
gatcaggataatgtgacaaagaattatccagggggtgaggaacaccagaaaggccctcat
gcagaagggggaaatgaagaagaggaggagagtgaagatgaagaaagtgaggaagaagac
actgaagaagaagaagatgaggagaagttgttggatgatccaaatgttagagaatgtgtt
gctgtcgggaactttgatgcccagcaggaaggggatctcacatttctgaaaggtgaaatc
ctgctcatacacaacaagaaggcagatggctggtgggtagctgaaaattccaagggagag
agaggccttgttcccaggacataccttgcggttcctaaggaagaggaagaaagccaggag
gagtcagaagaacacacagaagtggtggatgaaacagcggatggaactgaaattaaaaga
agaacagattcccactggagtgctgtccgagccatcatagagaatgacactgtggaggta
ctgaccaccacaggggcagttcctgcaggattccgcccatccatgcttttccatctcttg
gaggaaggtgaagagtttcgagcaagttactatttgcaacctaagcttactccatcccag
ctggcttttaaagacttggtgtggaactctgagagaaatactatccatcctagacccacc
agagtgtccctgattgtcactttatgcagctgcaagatgatccctctgcctggaaccggt
gtgcgggtcctcagccaccatgtccggctctgcctcttcgatggcagccgggtgctgagt
aacattcacacagtgagagccatgtggctgcctaaaaatcctcaaacttggaccttttct
ccaagggtgatgggcatcttacccagcttgcttgatggtgactcttttgtcaggtgcaac
tccctgtcttcagacactgggatattgtttgagcttggcatcacgtacaagtgcaattca
acaggtgaaagaggagagctgagctgtggctggacctttctgaagcttttcacttccagt
gggattcctgttccttccaaaatgtatgagctggtcctgagtggtggaactccctatgag
aaaggcattgaggttgacccatcaatatcaaggagaggctctgggggttttcagcagttt
atgagcctcaggaagcagcctgtgcttctggtgaaagtgaagtcaccaagtgtgcactca
aaagacatcctgaattttctccctgaaacattagttggaggcatgtgctacatccatctc
ctggtgttttatcggcaaatccttggagatgccctcctgaaggacaggatgagcatgcaa
agcacaggtgagcactggaggaagatcaggctcgtccggggaatgactcctgccaggtct
ccctttgacttaatctgtaatcctgttctagcaactttccctcaactcctggatcagcca
gacctgatggatgcacttcggagtgcctgggcagacaaagaaagaacattgaagagaatt
gagaagagagatcaagaattcctgaagtctgcatttgtcctagtgtaccacgactctgtg
ttccctctgctctgctccacgttcctccccagctacagatgggctgaggaagaggtggaa
ttgtctcgctggaaggtgatccatgacttcctgaaaaggagccgggagaaggatggtgca
ctggagtacctgctgtcatcagaaaacatccacaaagcctttgacatctcagagctggcc
tatgatttcttaggagaagtgaggggaaagagtcctggagaatga
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