Vidua chalybeata (village indigobird): 128786606
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Entry
128786606 CDS
T11587
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128786606 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vcha01009
]
128786606 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vcha04131
]
128786606 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
vcha03029
]
128786606 (RB1CC1)
Protein phosphatases and associated proteins [BR:
vcha01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128786606 (RB1CC1)
Membrane trafficking [BR:
vcha04131
]
Autophagy
Autophagosome formation proteins
ULK complex
128786606 (RB1CC1)
Mitochondrial biogenesis [BR:
vcha03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
128786606 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Lant_leader_dom
Pallilysin
HI_1622_C
Motif
Other DBs
NCBI-GeneID:
128786606
NCBI-ProteinID:
XP_053795907
LinkDB
All DBs
Position
1:complement(113394577..113459860)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIEDIKLKLTHLGSAVSIMAKIPLLECLTRYSYRECLGRLESSPEHGGAESEETEDGKSA
DLVLYPDVSKVNSKSMLASFCKSVEHSALEGTDPENVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECHQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLNDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVHALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTGITIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSAENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFRTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELRSLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENEHRLEQMQESHEVVMQEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRCQIDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELEMTALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLISNQEQDRQLLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKILQLEMQVNRSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLDEKKKLEEEVNKLRSSNFSPSTYLAAASEVCGACAADVPTDTDRLVADFGAEGRMD
SMMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacgttttcagcagagaatgagatggaattg
aaagttgaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
catgatgaacatcttcagcatcaaggctgggctgctataatggccaacttggaagattgt
acatactcttaccaaaagctgcttttcaagtttgaaaatgtgtattcaagctatttgcag
tccatagaggatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagatatagttacagagagtgtttaggaagactg
gagtcttcacctgaacatggaggagcagaaagtgaagaaactgaggatgggaaatctgct
gatttggtgctttatcctgatgtatctaaagtgaacagtaaatcaatgttagcgtcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatctggtcaaaatgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcaccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgacttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactacaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtagaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaagttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagatgggaaacatctatatgaagctgaaaaggcaaaacgggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctca
ttgaatgacctgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacatgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgag
caaaaggcctccaatagtcaagcatcaccacaatctgctaccacaccaaggatggaaagt
actacaggaatcacaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccgttagaagaattgtctccagacagcatt
gatgctcacacgttcgattttgaaactattgcccatccgaacttggagcaagctcttaag
caaggatcattagacttggattcattggcagagagtccagaatctgactttatgtctgca
gtaaatgaatttgtaatagaagaaaatccagtgtctcctaatgtaataagtgacccacaa
agcccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagg
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagcagaaaatgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggtata
aaagaagatctttgccatttcagaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaagctttcactt
gaaaaaacactaaatgataaacatcaaaatgaattacggtctttgaaaagtgagtatgaa
actaaaattaataaattattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctgttaggtcttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtggtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggcagtcgcgt
gaaattgtacttgaagacttgaaaaaacttcatgttgaaaacaatgagaaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggat
aaattaaaaaaagagaacgagcatagacttgaacaaatgcaggaatctcatgaggtagtt
atgcaagagaaacagcaacaagtagaagagttacaactcaaggtttcagatctgtctgat
ttgaggtgcaagctagaagttgaacttgccctgaaagaagcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatgtcagattgacaag
gaaactgaaagcttaagaaaggagatagataaattaaacaataaaatacaaatcagcagt
gatgaatatcaagtgggtttatcagaattaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaataggtatgaagaagaatcaaatttgcttagaactgaatta
aataaagtaacacttcttcatcaaaaaacggctgaggcagaaaaaagactttcagagcaa
ataacagaattgcaaagtaagttggagttggaaatgactgccctagagaaggaaaaaaca
gaaaaattgtctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagaaagaactgttgatatctaaccaagaacaagacaggcagttgctcattcagaag
ctcaattgtgaaaaagaggatgcagtacaaactgcttgtaaagagttggaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatactgcaacttgagatgcaagtgaatagg
agtcctcctgctgaatcatctgctgaatcaaacttagttgctgaacttcaggagaagctt
caggaagaaaaaatgaagtttttagaacaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcgctcactgcagagcagcagaccaacttcaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgaccttagtgacaaactaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagataga
gctcgcttacttgatgagaagaagaaacttgaagaagaagttaataaactgagaagtagt
aatttttctccatcaacctacttggcagcagcatcagaagtttgtggagcctgtgcagct
gatgtgcccacagacacagatagattggttgctgactttggggctgaggggagaatggat
tccatgatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgctagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtcccaaagcatgtcgtcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggtactcattatcttggatgaaaggcatgac
aactacgtgttgtttactgtcagtccaaccttgtatttcttgcactcagagtcccttgct
gcactggatctcaaaccaggtgagtgtgcatcgggtgcatctaggagaccatgggtgcta
ggaaaagtgatggaaaaggagtattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttaggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
