Vidua chalybeata (village indigobird): 128787047
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Entry
128787047 CDS
T11587
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128787047 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
vcha00536
]
128787047 (SLIT2)
Glycosaminoglycan binding proteins [BR:
vcha00536
]
Heparan sulfate / Heparin
Axon guidance molecules
128787047 (SLIT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
EGF_TGFA-like
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
128787047
NCBI-ProteinID:
XP_053796889
LinkDB
All DBs
Position
4:complement(56224663..56486532)
Genome browser
AA seq
1520 aa
AA seq
DB search
MMCDWGKLTLSLGLLLAMAGAVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSH
LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPET
ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT
ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA
IQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGT
EDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLE
ATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVQHKMFKGLESLK
TLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCN
CHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLARCPA
ECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI
STLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLS
ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG
PVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHACISNPCHHG
GTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYT
GELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFDDCQDNKCKNGA
QCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCIIRESEPICQCLS
GYQGEKCEKLISINFVNKESYLQIPSAKIRPQTNITLQIATDEDSGILLYKGDKDHIAVE
LYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKTITNLSK
QSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGI
LPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQTNDPCLGNKCVHGTCLPIN
AFSYSCKCLQGHGGVLCDEEEMLLNPCQSIRCKHGKCRLSGLGKPYCECGSGYTGDSCDK
EISCRGERVRDYYQKQQGYAACQTTKKVSRLECKGGCSAGQCCGPLRSKRRKYSFECTDG
SSFVDEVEKVVKCGCTNCPS
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgactgggggaagctcaccctgtctctggggctgctgctggcgatggcgggc
gcggtggcgccgcagccgtgcccggcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacaagaatcacgaagactgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtactattgagagaggagcattccaagat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgagctg
ctctttctggggacgccgaagttatacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtcgacataaaaaatctgcaactggattacaac
cagatcagctgtattgaagatggggcatttagggctctgcgtgacctggaagtgctcact
ctcaacaataacaacatcactcgactatccgtggcaagtttcaaccatatgcccaaactc
agaacattccgccttcactccaacaacctgtactgcgactgccacctggcctggctgtcg
gactggctgcggcagcggccgcgcgtgggactctacacgcagtgcatgggcccgtcccac
ctccgcgggcacaacgtggccgaggttcagaagcgcgagtttgtctgcagcggtcaccag
tcctttatggctccatcctgcagtgtcttgcactgccctactgcatgcacctgtagcaac
aacattgtggactgtcgtgggaaaggccttactgagatcccaacaaaccttccagaaacc
atcactgaaatacggttagaacaaaattcaatcaaggtcatacctcctggagctttctcc
ccctataaaaagcttcgaagaattgacctgagcaataaccagatctctgaagcagctcca
gatgctttccagggcttacgttcactcaattcactagtcctctatggcaataaaatcaca
gaacttccaaagggcctatttgaaggactcttttctctgcaactgctattattgaatgcc
aacaagatcaattgtctgcgagttgatgcatttcaagatctgcacaacttgaatcttctt
tctttgtatgacaacaagcttcagaccattgcaaaaggcaccttctcacccctacgtgcg
attcagaccttgcatttggctcagaacccatttatctgtgactgccatctgaagtggctg
gcggattaccttcacacaaaccccattgagaccagtggtgcccgttgcaccagcccccgc
cgtctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgctgctcaggcact
gaagattacagatccaaattaagtggagactgctttgcagatttggcttgccctgagaaa
tgtcgctgtgaagggaccacagtggactgctccaatcagaaactcaacaaaattcctgat
cacattccccagtacacagcagagttgcgactaaataacaatgaattttcagtcctggaa
gctactggaatctttaagaaacttcctcagctgcgtaaaataaacctgagcaataacaag
attacagatatagaagaaggagcatttgatggagcctctggtgtgaatgaactattgctc
acaagcaatcgcttggaaagtgttcaacacaaaatgttcaaaggactagaaagtctcaaa
acactgatgctgaggagcaacagggtgagctgtgtgggaaatgacagcttcacagggctg
agctctgtccgcctgctctcgctgtatgacaaccagatcaccaccgtggcacccggctcc
ttcgacacgctgcattcactctctacactaaacctcttggccaatcccttcaactgcaac
tgccaccttgcatggcttggagactggctgaggaagaaacgcattgtgacagggaaccct
cgctgccaaaaaccctacttcctcaaagagattccaatccaggatgtggcaattcaggat
tttacatgtgatgatggaaatgatgacaatagctgttctcccctggcccgctgccctgca
gaatgtacttgtctggacacagtagttcgctgcagcaacaaaggtctaaaagctttgcct
aaaggcatcccaaaagatgtgactgaactttatttggatggaaatcagtttacccttgtt
ccaaaagagctttccaactacaagcatttgacactcatagatttaagtaacaacagaatc
agcactctttctaatcagagcttcagcaacatgactcagctgcttaccttaattcttagt
tacaaccgcctaagatgtattcctgcacggacttttgatgggttgaaatcacttaggttg
ttatctttacatggcaatgatatttctgttgttcctgaaggagcctttaatgatctttca
gcattatcacacctggctattggcgcaaatcctctttattgtgattgtaatatgcagtgg
ctatctgactgggtaaaatcagaatacaaagaacctggtattgcacgttgtgctggtcct
ggagaaatggcagataaacttcttctcacgactccttctaagaaatttacttgccaaggg
cccgtggatgttaatattcttgcaaagtgtaatccctgtttatcaaatccatgtaaaaat
gatggaacctgcaataatgatccagttgacttctacagatgtacatgcccatatggtttc
aagggacaagactgtgatattcctattcatgcttgcattagtaacccgtgccaccatggt
ggaacttgtcatttgaaagaaggagaaaaagatggtttctggtgcacttgtgcagatgga
tttgaaggtgagaactgtgaagtaaatgttgatgactgtgaagacaatgactgtgaaaac
aattctacttgtgtggatggaattaataactatacttgcctttgtccacctgaatataca
ggtgaactctgtgaggagaaattagatttctgtgcccaaaacctgaatccttgccagcat
gattcaaagtgtatcttgacacccaaaggatacaaatgtgattgcacacctggatatgta
ggtgagcattgtgatatcgactttgacgactgccaggacaacaaatgcaaaaacggagcg
cagtgcactgatgcagttaatggatatacgtgcatttgcccagaagggtacagcggcttg
ttttgtgagttttcaccaccaatggttctacctcgcaccagcccttgtgataattacgaa
tgtcaaaatggggcccagtgtatcataagagaaagtgaaccaatctgtcagtgtttatca
ggctaccagggtgagaagtgtgaaaagctgattagtataaacttcgtcaacaaagaatcc
tatctgcaaatcccttcagctaagatacgcccccaaaccaatatcactctacagattgcc
acagatgaagacagtgggatcctgctgtacaaaggcgataaagatcacatagcagtggaa
ctgtaccggggtagagtgagggtcagctatgacacaggatcatatccagcctctgctatt
tacagtgtggaaacaattaatgatggcaatttccacattgtggagctgctagctatggat
cagattctatctttatctattgatggaggaagccccaagacaattaccaatttgtccaag
caatccactctgaattttgattctccgctgtatgtaggaggcatgcctgtgaaaaataac
atagcagctttgcgccagtcaccagggcagaacggcacgagcttccatggttgcatccgt
aatctgtatatcaacagtgaactccaggacttcagaaatgtgcccctgcaagtgggaatt
ctgccaggttgtgagccttgtcataagaaggtttgtgtgcatggcacatgccatgctacc
agccagtcaggcttctcctgtgagtgcgaaggaggatggaccggaccactctgtgatcaa
caaactaacgacccgtgtctcggaaataaatgtgtgcatggtacctgcttgccgatcaat
gcattttcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagag
gaaatgctgcttaacccctgccaatccatcaggtgtaaacatggcaaatgtaggctttca
ggacttgggaaaccatattgcgaatgcggcagcggatacacgggggacagttgtgataaa
gaaatctcttgtcgaggggaacgagtccgagattactaccaaaagcagcaagggtatgct
gcgtgccagacgaccaagaaggtatcgagactagaatgtaaaggcgggtgctcagccggt
cagtgctgcgggccactgcggagcaagaggcggaaatactccttcgaatgcactgacggg
tcatcctttgtagacgaggttgaaaaagtggtgaagtgtggctgtacaaattgtccctcc
taa
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