Vidua chalybeata (village indigobird): 128787480
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Entry
128787480 CDS
T11587
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04621
NOD-like receptor signaling pathway
vcha05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
128787480 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
128787480 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
vcha04054
]
128787480 (NOD1)
Pattern recognition receptors [BR:
vcha04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128787480 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
WHD_NOD2
LRR_4
AAA_16
FumaraseC_C
AAA_22
NPHP3_N
RNA_helicase
NB-ARC
PIF1
Motif
Other DBs
NCBI-GeneID:
128787480
NCBI-ProteinID:
XP_053797621
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All DBs
Position
1:42505849..42527089
Genome browser
AA seq
951 aa
AA seq
DB search
MEGQLCANVDISVNKPPAASPQSFIGLLKVHRELLVGRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEISEYFIYVLQKVTDAYYELQPWLDEIGYKPSENI
SSKPVVNTDPVSRYCQKLRHELGRDSKFFMLYAQKEEMLLEEIYSNSIMELVNFTNESLG
QVGQLEALFDDAVGLINEDGETVYVYGDAGIGKSILLQKIQSLWARKELDIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEICSPNEPIHPLALLISLLRGKLLKGSKKILTARTGTEIQKNIIRKKVLLRGFSRN
NLKEYTAMFFKDEQRRALVSNQLEANPNLCSLCSVPLFCWIIFKCFEHFHSMFDSHELPD
SSVTLTDVFLLMIEVHLNRSVKTSLLKSNIRSQAEMFKSRKESLLALGKMAYKGMENSSF
IFEQEEVLSANISEEDLQLGFLRTVKGYSGCDSQATYEFLHLTLQSFFTALFLVMEEKVG
TKELLEFFNECSSLETAQPTCLRIPWLNKQLAGEDPFQNKEHFNFTNMFLCGLLSGSRQK
LFRHLVSPAVIKRKRKTLITYLGESMKSHLKGYTRSRLKSYNQVQMQPNFVWMLRCLYET
QSEKVGRMAARRMHANYIKLAYCNACSADCSAISFLLHHFQKHLALDLDNNNINDYGIKQ
LQPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVSFLGLYNNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLAFNGITTEGGKSIAEAMQHNNSVRIFWLTKNELDDEAAMSFAEMLKVNKKLVHLW
LIQNQITAKGVKCLSEALKENTTIQEICLNGNLISQEEAKAFENEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgtgctaatgtggacatttctgtgaacaaacctccagcagcaagc
cctcagtccttcattggtttgctgaaggttcaccgagagcttctggttggtaggatccga
aacacacagtgtttgattgataacttgattaagaatgactacttctccactgaagatgca
gagattgttgtccagtttcctactcaagcagataaggttcgcaaaattctagacttggtt
caaagcaagggagaagaaatttcggaatatttcatctatgtcctgcagaaagtcactgat
gcttactatgagcttcagccttggctggatgaaataggttacaagccttcagagaatatt
agtagtaaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagttttttatgttgtatgctcagaaggaggagatgctgctt
gaagaaatctactccaacagtattatggaactggtcaattttaccaatgagagtcttggc
caggtgggtcaattagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactgtttatgtctacggtgatgcaggaattggaaaatccatcttgttgcaaaagata
caaagcctttgggccagaaaggaattggacataggggccaagtttttcttccgttttcgt
tgtaggatgtttagctgtttcaaggaagatgaagccatatgtttgaaagacctgctcttc
aaatataattgctacccagaccaggaccccacagaagtgttccatcacattttgcaattc
cctcatacagttcttttcacttttgatggctttgatgagatctattccaattttgatctc
agcagcgtacctgagatatgttcacccaatgaacccatccaccccctggcactgctcata
agccttctcagaggaaagcttcttaaggggtccaagaaaattcttactgccaggacagga
actgagatccaaaaaaacatcattaggaagaaagtgttgctccgcggtttctccaggaat
aacctgaaggaatacacagctatgtttttcaaagatgagcagcgacgagcactggtatca
aaccagttggaagctaacccaaatctctgcagtttgtgttcagtgcctttattttgctgg
attatctttaaatgctttgagcacttccactccatgtttgacagccacgagcttccagac
agttctgttacattaacagatgtatttttgctcatgattgaagtgcacctgaaccgatct
gtgaaaacaagtttgctgaagagcaatatcaggagccaagcagagatgttcaaatcaaga
aaggaaagtcttctagctttgggtaaaatggcatacaaagggatggagaactcttccttt
atctttgagcaggaggaagtcttatcggcaaacatctctgaagaagatttgcaattgggc
tttctcaggacagttaaaggttacagtggctgtgacagtcaggccacttatgagttcttg
cacttaacccttcagtcttttttcacagctttgttcttggttatggaggagaaggtgggt
accaaggagttacttgagtttttcaatgaatgttcttccctggagactgcccagcctact
tgccttcgtatcccgtggttgaataaacaactagcaggggaggatcctttccaaaataaa
gaacactttaattttaccaacatgtttctttgtggcctactttctggatccaggcagaag
ctcttcagacatttagtttcacctgcggtcattaagagaaagagaaaaacactcatcaca
taccttggggagagcatgaaatcccacctgaaaggctacactcggtccaggcttaaaagc
tacaatcaggtgcagatgcagcccaactttgtgtggatgctgaggtgcctgtacgagacg
cagagtgagaaggtggggaggatggcagcccgccgcatgcacgccaactacatcaagctg
gcctactgcaacgcctgctctgctgactgcagcgccatttcctttcttctgcaccacttc
caaaagcacctggctctggatttggacaacaacaacatcaatgactatggaataaaacag
ctgcaaccttgtttcagcaagcttgcagtgatcaggctcagtgtaaatcaggtcacagat
cacggcgtaaggatcttgtatgaagaactctccaaataccaaattgtatctttcttgggc
ttatacaacaaccaaatcactgatgttggagccaaatatgttgcaaaattaattgaagag
tgttcaagcctggaatatgttaaaataggagcaaacaaaataacgagcgaaggagggaag
tgccttgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtggggtaat
caagttggagatgaaggagcaaaagcatttgcagaggccctgaggaaccaccccaggtta
acaaacgtgagtcttgcattcaatggcatcacaacagagggaggcaaaagtattgctgaa
gccatgcagcacaacaactccgtgagaatattctggttgactaaaaatgagctggatgat
gaggcagcaatgagttttgcagagatgctgaaggtcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggggtgaagtgcctcagcgaagctctcaaggag
aacacaactattcaagaaatctgcttgaatgggaacctgataagccaagaagaggccaaa
gcttttgaaaatgaagagcggatcatttgcttttga
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