Vidua chalybeata (village indigobird): 128787879
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Entry
128787879 CDS
T11587
Symbol
TNPO3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha03013
Nucleocytoplasmic transport
vcha03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128787879 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128787879 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcha03016
]
128787879 (TNPO3)
Transfer RNA biogenesis [BR:
vcha03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
128787879 (TNPO3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
TPR_TNPO3_IPO13_4th
HEAT_MROH2B_C
RESC9_N
Importin_rep_3
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
128787879
NCBI-ProteinID:
XP_053798400
LinkDB
All DBs
Position
5:72207976..72230293
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AA seq
878 aa
AA seq
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MERGPGRPSLQLVQQAVQALYHDPDPSGKERASCWLGELQRSVHAWEISDQLLQIHQDVE
SCYFAAQTMKMKIQTSFYELPTDSHASLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQ
MASWKGCVQTLVEKYSNDVTSLPFLLEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSS
TVVSLLVTCVEKAGNEEKMLIKIFRCLGSWFNLGVLDSTFMANSKLLSLLFEVLQQDKTS
SNLHEAASDCVCSALYAIENVETNLPLALQLFQGVLTLESAYHMAVAREDLDKVLNYCRV
FTELCETFLDKIVCTPGQGLGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKTDD
AVIHSIFKAYIQRLLHALARHCQLDSDHEGVPEETDDFGEFRMRVSDLVKDLIFLVGSVE
CFAQLYATLKDGNPPWEVTEAVLFIMASIAKSVDQENNPTLVEVLEGVVRLPESVHTAVR
YTSIELVGEMSEVVDRNPQFLDPVLGYLMKGLCDRRLASAAAKAIHNICSVCRDHMAQHF
SGLLEIARALDSFALSPEAAVGLLKGTALVLARLPLEKISECLSELCAVQVLALKKLLSQ
EPSNGLSSDPTVPLDRLAVIFRHTNPIVENGQVHPCQKVIQEMVNVYREHQHSCFLYLGS
ILVDEYGMEEGCRQGLLDMLQALCIPTFQLLEQPNGLQNHPDTVDDLFRLAARFIQRSPV
TLLRSQVMIPILQWAIAATTLDHRDANCSVMKFLRDLIHTGVANDHEDDFEVRKELINQV
MTQLGQQLVNQLLQTCCFCLPPYTLPDVAEVLWEIMQIDRPTFCRWLENSLKGLPKETTG
GAIQVTHKQLTDFHKQVTSAEECKQVCWALRDFTRLFR
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgggccgggccggcccagcctgcagctcgtccagcaggccgtgcaggcgctc
taccacgaccccgaccccagcggcaaggagcgggcgagctgctggctgggcgaactgcag
cgctcggtccatgcttgggagatctcggaccagctgctgcagatccaccaggatgtggag
tcctgctactttgcggcgcagaccatgaagatgaagatccaaacttcattctatgaactc
cccacggattcccacgcctcactccgggactctttgctgtcccacatccagaacttgaag
gacctgtccccggtcattgtcacacagcttgctttggcaatagctgacctcgccctgcag
atggcttcgtggaagggctgtgtgcagacactggtggagaagtacagcaatgacgtgacg
tcgctgcccttcctgctggagatcctgacggtgctgcccgaggaggtgcacagccgctcg
ctgcgcatcggggccaaccgccgcaccgagatcatcgaggacctggcctactactccagc
accgtggtgtccctgctggtgacgtgtgtggagaaagcgggcaacgaggagaaaatgctc
atcaaaatcttccggtgcctgggcagctggttcaacctgggtgtcctggacagcaccttc
atggccaacagcaagctgctgtccctgctcttcgaggtgctgcaacaggacaagacctcg
tccaacctgcacgaggctgcgtcggactgcgtgtgctcggccctctacgccatcgagaac
gtggagaccaacctgcccctggccctgcagctcttccagggcgtgctcaccctcgagagt
gcctatcacatggctgtggcacgggaggacctggacaaggtgctcaactactgccgtgtg
ttcaccgagctgtgcgagaccttcctggacaagatcgtgtgcacgccgggccagggcctg
ggcgacctgcgcacgctggagctgctgctcatctgcgcggggcacccgcagtacgaggtg
gtagaaatttcctttaacttctggtacagactgggggagcacctgtacaagacggacgat
gctgtgatccacagcatcttcaaagcctacatccagcgcctgctgcacgcgctggcccgg
cactgccagctcgactccgaccacgagggtgtcccggaggagaccgatgacttcggggag
ttccggatgcgtgtctcggacctggtgaaagacctgatcttcctggtgggctcagtggag
tgctttgctcagctctacgcgacgctcaaggacgggaacccgccctgggaggtgacagaa
gctgtgctcttcatcatggcctccatcgccaagagcgtcgaccaggagaacaacccgacg
ctggtggaggtgctggagggcgtggtgcggctgcccgagtcggtgcacacggccgtgcgc
tacaccagcatcgagctggtgggcgagatgagcgaggtggtggacaggaacccgcaattc
ctggatcccgtgctgggctacctgatgaaggggctctgtgaccggcgcctggcgtcggcc
gcggccaaggccatccacaacatctgctccgtgtgccgggaccacatggcccagcacttc
tcggggctgctggagatcgcccgcgccctcgactccttcgcgctgtcacccgaggctgcc
gtggggctgctcaaggggacggcgctggtgctggcccggctgcccctggagaagatctcg
gagtgcctgagcgagctctgcgccgtgcaggtgctggcgctcaaaaagctgctctcccag
gagccaagcaatggcctctcctcagaccctacagtgcccctggatcgactcgctgtcatt
ttcagacacaccaaccccattgtcgagaacggccaggtgcacccgtgccaaaaagtgatt
caggagatggtgaatgtgtaccgggaacaccagcactcctgtttcctctacctgggcagc
atcctggtggatgagtacggcatggaggagggctgccggcagggcctgctcgacatgctg
caggctctctgcatccccaccttccagctcctcgagcaacccaatggcctccagaaccac
ccggacaccgtggatgacctcttccgcctggcagccaggtttatccagcgcagccccgtc
accctcctgcgcagccaggtgatgatcccgatcctgcagtgggccatcgctgccaccacc
ctggaccaccgggacgccaactgcagcgtcatgaaattcctgcgggatctgatccacact
ggggtggccaacgatcatgaggacgactttgaggtgcggaaggagctcatcaaccaggtg
atgacccagctggggcagcagctcgtgaaccagctcctgcagacgtgctgcttctgcctc
ccaccctacaccctgcccgacgtcgccgaggtgctctgggagatcatgcagatcgaccgc
ccgacgttctgccgctggctggagaactcgctgaaggggttgccaaaggaaaccacgggt
ggagccatccaggtgacacacaaacagctcaccgacttccacaagcaggtcaccagtgct
gaggaatgtaaacaagtctgctgggctctgagggacttcacccgcctgttccgatag
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