Vidua chalybeata (village indigobird): 128788077
Help
Entry
128788077 CDS
T11587
Symbol
POC1B
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
vcha Vidua chalybeata (village indigobird)
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vcha03036
]
128788077 (POC1B)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
vcha03037
]
128788077 (POC1B)
Chromosome and associated proteins [BR:
vcha03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128788077 (POC1B)
Cilium and associated proteins [BR:
vcha03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128788077 (POC1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML_2
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
ASA1
DSE1_N
Beta-prop_WDR19_1st
Beta-prop_Vps41
Ge1_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SPT8
RMC1_N
eIF2A
Beta-prop_NOL10_N
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
128788077
NCBI-ProteinID:
XP_053798800
LinkDB
All DBs
Position
5:complement(12224597..12269559)
Genome browser
AA seq
500 aa
AA seq
DB search
MGIRALGAADESGARRAEPGARGSHGPLPPAPPMASPLEDPVLIRPFRGHTAAVTGVAFD
ANSAGMVTCSADRLLILWKLNTQCGAYRFSGHAEAVTSVEFSPDGQVLASASHDHTVRLW
IPCIHGESSVLKGHTASVRSVSFSHDGCSVVSASNDKLIKIWSVCYQRLLFTLFQHTGWV
RCAKFSPDGRIIASCGEDKSINIWDTRNKICVNSFSDYEEFPTFVAFNPSGTCIASAGSN
STVKLWDIRTNKLLQLFKVHRAGVNCISFHPSGNYLITASSDGTLKILDLLGERLIYTLH
GHKGPVLCVAFSKGGENFASGGVDAQVLLWKTNFSTLNYEEVLKHNFRRTRIDDSPHLLD
VYTRSSHFHDEKRKSVEVNPTFDVPDTQTPDPVIIDIRTSSYISTPDVGRSEELQSPSAS
FSAISSKSKAESESGSAVHSVGQHRGIPSSVDCALDHIVGQLEMLTLTISVLEQRLTCTE
DKLKKCIRDQQKMLLKGKRN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggggatccgcgctcttggcgcggcggatgaatccggggctcggcgggccgagcccgga
gcgcggggctctcacgggccgctcccccccgctccgcccatggcctccccgctggaggac
cccgtcctgatccggcctttccgcggccacacggcggcggtgacgggcgtcgccttcgac
gcgaactcggcggggatggttacctgctctgcggataggcttcttatattgtggaagctg
aatacgcagtgcggtgcctacagattttcaggccatgcggaagcggtgacaagcgtagag
ttctcaccagatgggcaggtgctggcttcagcttctcatgatcacactgtcaggctatgg
attccttgcattcatggagaatcatcagtattgaaaggtcatacagcatctgttcggagt
gtgagcttctcccatgatggctgctctgtagtttcagcatccaatgataaattaataaaa
atatggagtgtttgctatcagcgccttttgtttaccctattccaacacactggttgggtt
cgctgtgccaaattttcacctgatggaagaataatagcatcttgtggtgaggacaaatct
attaacatctgggatacaagaaataaaatttgtgttaatagcttctcagattatgaagaa
tttccaacttttgtggctttcaacccaagtggaacatgtatagcttctgcaggttccaat
agcacagtgaaactatgggatattcgaacaaacaagctactgcagcttttcaaagttcac
agagcaggggttaattgtatatcattccatccttctggtaactacctcatcactgcttct
tctgatggtacccttaagattctggacctcttaggagaaagacttatttacactcttcat
ggacacaagggacctgtactttgtgtagctttttcaaaaggcggtgaaaattttgcctca
ggtggagtggatgctcaggtattactgtggaaaaccaactttagtactttgaattatgaa
gaagttctcaaacacaattttagaagaacacgtattgatgattctcctcatcttcttgat
gtttacacaagatcatctcatttccatgatgaaaaacgtaagtcagtggaggtcaaccct
acctttgatgtgcctgatacacaaacacctgacccagttatcatcgatattagaacatct
tcatatatcagtactcctgatgttggcagaagtgaagaactgcagagtccctccgcttct
ttctcagcaataagttcaaaaagcaaagcagagagtgaaagtgggtcagctgtgcatagc
gtgggacagcacagaggcatcccctcctccgtggactgtgctttggaccacattgtgggg
cagctggagatgttaactctaactatttcagtcctggaacaacgtcttacgtgtacggaa
gataaattgaaaaaatgcataagagatcagcaaaaaatgttacttaagggaaaacggaac
taa
DBGET
integrated database retrieval system
