Vidua chalybeata (village indigobird): 128788251
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Entry
128788251 CDS
T11587
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04510
Focal adhesion
vcha04512
ECM-receptor interaction
vcha04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128788251 (LAMB4)
04518 Integrin signaling
128788251 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128788251 (LAMB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
Rod_CreS
DUF724
Motif
Other DBs
NCBI-GeneID:
128788251
NCBI-ProteinID:
XP_053799151
LinkDB
All DBs
Position
5:58229946..58277493
Genome browser
AA seq
1807 aa
AA seq
DB search
MRLGLAILLHLMLIRPQHTQHDCDAGSCHPALGDLLQGRSKQLTASSTCGMNSPQKYCII
GYLEAEEKCFLCDSRYPYNLYTQHNSHMIENVITTFEPKRKKKWWQSENGIDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKVFRYFAHDCAASFPNISSSPAKSVGD
VVCDSRYSDIEPSTEGEVVLKALDPSFEIENPYVPYIQDLITLTNLRINFTKLHTLGDVL
LGRRHSDSNEKYYYAIYEMVVQGSCFCNGHASQCDSMQNLRGDVFHQSGMVHGRCVCHHN
TEGFSCERCKDFYNDAPWRPAEGTQDNACKRCNCNSHSSRCHFDMAVYLASGGVSGGVCE
DCQDNTTGQHCDRCKPSFYQDPLKVISDPQPCLPCNCDPEGTLHEGVCESRTDPTLGTVA
GRCPCKENVEGARCDKCKANYYGLSSSDPLGCQPCNCDPLGSLPFSVCDPATGECLCQRF
TTGQRCEKCLAGYWGLGSSLYGCFPCDCDIGGSQNNLCSLKDGQCECLPNIVSRQCNEPA
PGYFFLPLDYYIYEAEHAKPLSGSAPLVQPSTLPRCDIYFQKKGYEFVIENGKIVLHRNK
KRTARKSGLEQGVMQFGQDSDLAVVFRQPRAGRAVTWTGHGFARIPSGAGLSFAISNVPF
AMDFDITVRYEPELLEDWLASVAIQPAGILSGQHCKNKVLSQEPHELPLPATKRIAILQT
PVCLEPGTEYFVDVYFSQLPASDKKAKSFILIDSLGLIPRIGSVENLCSEKDLDEYQKYH
CIEIASEVGPHVLPEACARLIVSLSARIHNGAVACKCNPQGSLNANCSKLGGQCQCKANV
VGRCCDTCSAGSYGFGFHGCYACECHPQGSLSTLCDQVTGQCSCRRDVGGQRCSRCLAGY
FGFPHCRPCLCNGHAELCDPLTGECLNCRGFTAGSRCERCMDGYYGNPLDGEPCHPCMCP
GAPTSNRYFARSCYKDSQSAQLVCNCLEGYSGNQCDKCPSGFYKNPSSPGLDCAPCPCNN
NIDLTDPESCNSVTGECTKCLHNTHGANCQFCKPGYFGSALNQSCQSCMCNMAGVHPALC
PGGDTACLCDPATGACPCLPNVLGAMCDQCASGYWDLASGKGCQTCDCDPKNSQSNQCNQ
LTGQCPCKPGYSGRCCNECEENYFGNPQMHCVSCECNLEGTRQPTCDKATGACNCRVGVT
GRLCDQCSRGFEKDFPSCPRCHFCFDQWDTEIAALAQSVQGLMRFAAKLEDKGGRMPSCD
MRFKAFEDAISETERILRHPVLSLEALSGIRDFQGYLQQKVTQMDPLHSLPFEFPDLNKS
IEDIVEEANLVFELLQQKIHLHQSFQYFNFKEAISNIRKHSEVSLLAEQKTRGTIPIVRH
SEYTRNDTLAMLDHQVLNSSSVLQQLRMIKSPGIQNLNEKICGVPGDQPCATAACGGALC
QDSHGLRKCGGPDCTGALPLSSEAFRKAEETAVLLNNLTTQLQEPGNQVKSIRKMAEDSK
LKGSQFNGQLETARNQIEVDGEIAKEFIQKAKDFLLDESAPPEDIEKVANYVLQINLALT
PQELTGMLGKLQSIMNHCEKYKLNNKRNIKREDAQTLLVEAQEADKAAKALLPVGEINNK
LKNVVKSQGHSKSTIIKLNEEIRGIRTQISQAENQVNKTNDKLNDLSAKQTEMEDESATW
QAKMLMNNNQATKARAEAEAAHKRAQKIDNEFTDVKRKYTILQEKLKSQGPPKVTLEKVK
QLKEEAEKLAEETEKKIKRITDLEKKLQELNQTKQDKAEQLRQLEEQVIAIKDEIMEQES
KYATCKS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggggctggccatcctgttacacctcatgctgataagaccccagcatacacag
catgactgtgatgctgggtcctgccacccagcccttggggaccttctccagggccgcagc
aagcaactgacagcctcgtcaacctgtgggatgaacagccctcagaagtactgcattata
ggctacctagaggctgaagagaagtgctttctctgtgattccagatacccatataatctc
tatacccagcacaacagtcacatgatcgaaaatgttatcacaacgtttgagcccaaaagg
aaaaagaagtggtggcagtcagaaaatggcattgaccatgtcagcattagattggaccta
gaaactttattccaattcagccatcttatcctgacctttaagacatttcggcctgcagca
atgctggttgagcgctctaccgattttggtcagacctggaaagtgtttagatattttgca
catgattgtgcagcttctttccccaacatctcttctagtccagcaaaaagtgttggagat
gttgtttgtgattcaagatattcagacatcgagccctccactgaaggcgaggttgtttta
aaagctttggatcccagctttgaaatagaaaatccatatgtgccatatatccaagatctc
attacattgacaaacctaagaatcaattttactaaactccacacccttggagatgttctg
cttgggaggaggcacagtgattccaatgagaagtactactatgccatctatgagatggtt
gtgcagggcagctgcttttgcaatggccatgccagccagtgtgattccatgcagaactta
cggggagatgttttccatcagtctgggatggtccatgggagatgtgtctgccaccataac
actgaaggtttctcttgtgaaagatgtaaagatttctacaacgatgctccctggaggcca
gctgaagggacacaagataatgcttgcaaacgttgtaactgcaacagccactccagcaga
tgccactttgacatggccgtgtacctggccagcggtggggtcagcggtggcgtttgtgag
gactgtcaggacaacaccactggccaacactgtgacaggtgcaaaccttccttttaccag
gatccactcaaagtcatctcagatcctcagccgtgcctcccatgcaactgtgaccccgag
ggtaccttgcacgagggcgtgtgcgagagccgcacggaccccacgctggggacggtcgcg
ggccggtgcccttgcaaggagaacgtggagggcgctcgctgcgacaagtgcaaggcaaac
tactacgggctgagcagcagcgaccccctgggctgccagccctgcaactgtgatcccttg
ggcagcttgcccttctctgtctgtgatcctgccacgggagagtgcctctgccagaggttc
accacaggacagcgctgtgaaaaatgccttgcaggatactggggtcttggcagcagcttg
tatggctgttttccatgtgactgtgatattggtggatcccagaataacttgtgctcgctg
aaggatggtcagtgcgagtgtctgcccaacatcgtgagccgccagtgcaacgagccagct
ccaggatacttctttctacccctggactattacatttatgaagctgagcatgcaaagccc
ctttctggctctgcacccttggttcagccaagcactcttccaagatgtgacatttacttc
cagaagaaaggctatgagttcgtgattgaaaatggaaagattgtgttacacaggaacaag
aaacgaactgcaagaaaatctggactggaacagggtgtgatgcagtttggacaggactcg
gatttggcggtggtattccggcagcccagagctggtcgggcggtcacgtggacaggacat
ggttttgcccgcatccccagcggagctgggctgagttttgccatcagcaatgttcccttt
gctatggactttgatatcacagttcgttatgagcctgagctcttggaagactggcttgca
agtgttgccatccagcctgctggtatcttgtcaggtcaacactgcaaaaacaaggtcctt
tcacaggagccacatgagttgcctctcccagctacaaagaggattgcaattctgcaaact
ccagtctgtctggagccgggaacagaatattttgtggatgtgtatttttctcagctccct
gcttctgacaaaaaggcaaaatcattcatcttgattgactcacttggacttattcccaga
atcggctctgtggagaacttatgcagtgaaaaggatttagatgagtaccagaagtatcac
tgtattgaaattgcatccgaagttgggcctcacgtcctgcccgaagcgtgcgcacggctc
atagtgagcttgtcagcccgaattcacaacggcgccgtcgcatgcaagtgcaatccccag
gggtcgctgaatgccaactgtagtaaactggggggccagtgtcagtgcaaagccaacgtc
gtgggacgctgctgtgacacctgctctgcaggcagctatggctttggcttccatggctgc
tacgcgtgtgagtgccacccgcaaggctcgctgagcacgctgtgtgaccaggtgacgggg
cagtgctcctgccgccgggacgtgggtggccagcgctgcagccgctgcctggctgggtac
tttgggtttccccactgccgtccctgcctttgtaatggccacgcggagctgtgcgaccct
ctgaccggagagtgcctcaactgccgcgggttcaccgctgggagccgctgtgagaggtgc
atggatggctattatggaaaccctctggatggagaaccctgccacccatgcatgtgccca
ggggcacctacaagcaataggtattttgcacgttcctgttacaaggactcccaatctgca
cagcttgtctgtaattgtctcgagggatattcaggcaatcagtgtgacaagtgtcctagt
gggttctacaaaaaccccagcagtcctgggcttgactgtgcaccatgtccctgcaataac
aacattgatttgacagacccagagtcctgtaacagtgtcactggagaatgcaccaagtgt
ttacacaacacccatggagcaaactgccagttctgcaaaccaggttattttggctcagcc
ctcaatcaaagctgtcaaagctgcatgtgcaatatggcaggtgttcaccctgccctgtgc
ccggggggggacacagcctgcctgtgtgacccagccacaggagcttgtccttgcctgccc
aatgtgctgggtgccatgtgtgaccagtgtgcctctggctactgggacctggctagcgga
aaaggatgtcagacctgtgactgtgatccaaaaaactcccaaagcaaccagtgcaaccag
cttacaggccagtgtccatgtaagccaggttacagtggaagatgctgtaatgaatgtgag
gaaaactactttggcaatccccagatgcattgcgtttcatgtgagtgtaacctggagggg
acccgccagcccacgtgtgacaaagccaccggcgcgtgtaactgccgtgttggtgtcacc
ggccggctctgcgaccagtgcagccgcggctttgagaaggactttccctcctgccctcgg
tgtcatttttgttttgatcagtgggacactgaaattgctgctcttgctcagagtgtgcag
gggttaatgaggtttgcagcaaagctggaagataaaggaggacgaatgcccagctgtgac
atgcgcttcaaagcctttgaagatgccatttctgaaacggaacgcattttgagacatcct
gtcctttcactggaggccctttcaggcatcagggattttcagggctaccttcaacaaaaa
gttacacagatggatccccttcacagtttgccctttgagtttcctgaccttaacaagagc
atagaagatattgtagaagaagccaacctagtgtttgaacttctacaacaaaaaatacat
ctgcatcaaagttttcagtacttcaacttcaaagaggccatcagcaacattaggaaacac
tctgaagtatcattgctggcagaacagaagaccagggggacaatccctattgtaagacac
tcagagtacaccaggaatgacacactcgccatgttggaccatcaggtcttaaactcaagc
agtgtgctacaacagctcagaatgatcaaaagccctggcatccaaaacttaaatgaaaag
atctgtggtgttccaggagaccagccatgtgccacagcagcctgtgggggagctttgtgc
caggacagtcatggactaaggaagtgtggtggcccagactgcactggagctcttcctctc
tcctctgaggcctttaggaaagctgaggagactgctgtgttgctaaataacttgactact
cagctacaggaacctgggaatcaggttaaaagcattaggaaaatggcagaagacagcaaa
ctgaaaggctcacaatttaatgggcaactggagacggctaggaatcaaattgaagttgat
ggagagatcgctaaggagttcatccaaaaagcgaaagacttcttgttagatgagagtgca
cctccagaagacattgagaaggtggcaaattacgttctgcaaataaaccttgccctgact
ccacaagagctcacaggcatgcttggcaaactccaaagcattatgaaccactgtgagaag
tacaaactgaataataagagaaacataaaaagggaggatgctcagacactgctggtggag
gcacaagaagctgacaaagcagctaaagctcttctgccagtgggtgaaattaataataaa
ctaaaaaatgttgtgaagtcccaagggcactccaaaagcaccatcataaagttaaatgaa
gagatacgaggcatcagaacacaaatctctcaggctgagaaccaagtgaacaagacaaat
gataaactaaatgacttgtcagccaaacagactgagatggaagatgaaagtgccacatgg
caggcaaaaatgctgatgaacaacaatcaagctacaaaggcaagagcagaggcagaagca
gcccacaagcgagcccagaaaattgataatgaatttactgacgttaaaagaaagtatacc
attcttcaagaaaagctaaaaagccaaggacctccaaaagtaacactagaaaaagtgaag
cagttgaaagaagaagcagaaaagctggctgaagagactgaaaagaagataaaaagaata
acagatttggagaagaagcttcaggaactgaatcaaaccaaacaagataaggcagagcaa
ctgagacaactagaggaacaagtgatagccattaaagatgaaattatggagcaggaaagc
aagtatgcaacatgcaagagttag
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