Vidua chalybeata (village indigobird): 128788276
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Entry
128788276 CDS
T11587
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
vcha Vidua chalybeata (village indigobird)
Pathway
vcha04510
Focal adhesion
vcha04512
ECM-receptor interaction
vcha04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
vcha00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128788276 (LAMB1)
04518 Integrin signaling
128788276 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128788276 (LAMB1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
128788276
NCBI-ProteinID:
XP_053799188
LinkDB
All DBs
Position
5:58282082..58324362
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AA seq
1785 aa
AA seq
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MGRFPLYLCCCLALWPAAAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPE
PYCIVSHLQEDKKCFICDSEDPFHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWHVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFVKLHT
LGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVEGLDEEVEGMVHGHCMCRH
NTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVC
DDCQHNTVGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLI
AGQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCK
RLVTGKQCNQCLAEHWGLSNDMDGCRPCDCDQGGALSNNCSSESGQCECRPHMFGRQCNQ
VEPGYYFISLDHYIYEAEEANLGPGVNIIERQSTPDRTPSWTGIGFVRVPEGAYLEFHID
NIPYSMEYDVLIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGLNYTIRLELPQYSSVDTETENPYTLIDSLVLMPYCKSLDIFTVGGSG
EDVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLS
SVCDPNGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHVRGSYNAFCDVETGQCHC
FPGVYGRQCDRCLPSFWGFPSCQPCHCNGHADDCNPYTGECLSCRDHTAGHNCERCQAGY
YGDPILGSGDHCRPCPCPDGPESGRQFASGCYQDPVTLQVVCVCSVGYIGSRCDECASGF
FGSPDEVGGACQPCQCNNNIDTTDPEACDKRTGACVKCLYHTEGENCHLCREGYYGSALQ
QDCRKCVCNYLGTVREDCEGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLASGTGC
EQCDCDPARSLGPACNEFTGQCHCMPGFGGRTCRECQELFWGDPGVECLACDCNPRGIQT
PQCDRATGQCICNEGVEGLHCDKCSRGYSGFFPDCVPCHQCFALWDVIISELANRTQLFL
DRANTLKITGVTGPYQQTLNTLEEKLTEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVT
VKIADIEENLSALSAKSNSTDTDLSALETDAKSLDHVVKELAEQLEFIKISDVRGALDSI
TKYFQMSLEAEERVNASTVHPDSAVELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDEL
AGKLQSLDLSEVAEKTCGTAPGASCAESECGGLSCRTDEGKKKCGGPGCDGLVTVAHNAW
QKAMDFDRDILSALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLR
NLIKQIRDFLMQDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVIL
QQSAGDIARAEMLLEEAKRASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIK
GTQDLLTSIESENAASAETLNNATLRLFELEKSVEDLRQKATTNSGNVGNIEDKIISAKQ
NAEEVKKVLNNELSGKYRTVEELIAKKTEESAEARRKAGVLQDEAKALLAQANSKLQLLK
DLENTYENNQKVLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcttcccgctgtacctctgctgctgcctcgcgctgtggcccgcggcggcacag
gagcccgagtacagctatggctgcgccgagggcagctgctaccccgccaccggcgacctg
ctcatcggccgcgccgcccgcctctccgcctcctccacctgcggcctccgccagcccgag
ccctactgcatcgtcagccacctccaggaggacaaaaaatgtttcatatgtgattcggag
gatcccttccacgatactctcaatcctgacagtcatcgcattgaaaatgtcgtcaccaca
ttcgctccaaatcgcctgaagctctggtggcagtcggaaaatggtttggaaaacgtaact
atccagctggacctggaggctgagtttcatttcactcatctcattatgaccttcaagaca
ttccgtcctgctgcaatgttgattgaaagatcatctgactttggacagacttggcacgtt
tacaggtattttgcttatgactgtgagagctcatttcctgggatttcaactggacctatg
aagaaagtggatgatataatctgtgattcccgatactctgacattgaaccttcaacagag
ggagaggtaatatatcgtgttctagatcctgcttttcgaattgaagatccatacagtcca
aggattcagaacttattaaagatcacaaatctgagagtcaaattcgtcaagctgcacacg
ctgggagataacctcttggactccaggatggagatccgagagaagtactactatgccatc
tacgacatggtggttcgtgggaactgtttctgctacggacacgccagtgagtgtgcgccg
gtggagggcttggacgaggaagtggaaggaatggttcatggtcactgcatgtgcagacat
aataccaaaggattaaactgtgagcagtgtttggatttctaccatgacttaccctggcgc
cccgctgaaggtcgcaatagtaacgcatgcaaaaagtgcaactgcaatggccactccagc
cagtgccacttcgacatggctgtgtacatgacgacggggaacaccagtgggggagtgtgc
gacgactgccagcacaacactgtgggacgcaactgcgagcagtgcaagcccttctacttc
cagcacccggagagagacctgcgggaccccgacgtctgtgagccttgcaactgtgaccca
gctggctcccagaatggtgggatctgcgaccgctacactgatttctccaccggcctcatt
gccggacagtgccgttgtaaattatttgtcgagggggagcgttgtgacctctgcaaagaa
ggtttctatggcctgagtgccgacgacccagcgggctgtcagtcttgtgcgtgtaatcct
ctgggtacccaccccggggggaatccttgtgattcggagacaggaaactgctattgtaag
cgtctggtgacaggaaagcagtgcaatcaatgtctggccgagcactggggcctgagcaat
gacatggatggatgtcggccgtgcgactgcgaccagggaggagcgttgagcaacaactgc
tcaagtgaatctggccaatgtgaatgccggccccacatgtttggacgtcagtgcaaccag
gtggagcctggctattacttcatttcacttgatcattacatctacgaggcggaggaagcc
aacttgggtcctggagtgaacataatagagcgccagtccacgccagaccgcacaccgtca
tggacaggcataggatttgtgagagtccctgagggggcgtacctggaattccacattgac
aacatcccctactccatggagtatgatgttctgatccgctacgagccacagttgcctgat
cagtgggaaaaagctgtgatcagtgtctcacggccaggcaagattcctacaggtagccgg
tgtggcaacacagttcctgatgatgataatcaagtggtctcactgtcacctggatccaga
tacgttgttctcccgcggcccgtgtgcttcgagaaggggctgaattacaccatccgcctg
gagctgccccagtactcctcggtggatacagagactgagaacccgtacacactcattgat
tctcttgttctcatgccatactgcaaatcactggacatattcacagtgggaggctcgggc
gaagacgtggtcacgaacagtgcttgggaaactttccaaagataccggtgtttggaaaac
agcaggagtgttgtgaaaactcccatgacagatgtctgcaagaacataatattcagcatt
tctgcactactgcatgagactgcattatcatgccagtgtgaccctcaaggctccctgagt
tcggtgtgtgaccccaatggaggacagtgccagtgtcgtcccaacgttgttggaagacag
tgcgacagatgtgcccctggcacctttggctttgggccaagtggatgccgaccgtgcgag
tgccacgtccgaggctcttacaacgccttctgcgacgtggagacgggtcagtgccactgc
ttccctggggtgtacgggcggcagtgcgaccgctgcctgcccagcttctggggcttcccc
agctgccagccctgccactgcaatggccacgccgacgactgcaatccctacactggggag
tgcctgagctgccgggaccacacagccggacacaactgtgagaggtgccaggctggctac
tatggagaccccatcctgggatcaggtgaccactgccgcccctgcccttgccctgatggc
cccgagagtggacgccagtttgccagtggctgttaccaggatccagtcacactgcaagtc
gtgtgtgtctgtagcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttc
tttgggagccccgatgaggttggtggcgcctgccagccgtgccagtgcaacaacaacatc
gacaccactgacccagaggcctgcgacaagaggaccggagcgtgcgtgaagtgcctgtac
cacaccgagggtgaaaactgccacctctgcagagagggctactacgggagcgccctgcag
caggactgcagaaagtgcgtctgcaactacctgggcactgtccgggaggactgcgagggc
tcggagagctgtcgctgcgaggcggccacggggcagtgccggtgcctcccgaacgtggtg
ggacagacctgtgaccgctgtgccccccacacgtggcggctggccagcggcaccggctgc
gagcagtgcgactgcgaccccgcgcgctccctcggccctgcctgcaacgagttcacgggg
cagtgccactgcatgccaggtttcggaggccggacctgccgggagtgccaggagctcttc
tggggtgacccaggcgtggagtgcttagcatgtgactgcaaccctcgtggcatccagacc
ccacagtgtgaccgtgccactgggcagtgcatctgcaatgaaggggtggaagggctgcac
tgtgacaagtgctctcggggctactcaggcttcttccctgactgcgtgccgtgccaccag
tgctttgccctctgggatgtgatcatcagcgagctggctaataggacccagctgttcttg
gacagggctaataccctcaaaatcactggagtcactggtccataccagcagacgctcaac
acgctggaggagaagctcactgaaattaaaaccatcatcgctcaaaatccagcagccgag
cccctgaagaacattgggaatctcttcgaggaagcagaaaagctgacagcagatgttaca
gttaagatagctgacatagaagaaaacctttcagccttatcagcaaagagcaatagcaca
gacacagacctgagtgcactggagacagatgccaaaagtcttgaccacgttgtgaaagaa
ctcgcagagcagctagagttcatcaagatctctgatgttcggggagccttggatagtatc
accaagtatttccagatgtccctggaggcagaggagagggtcaacgcctccactgttcat
cccgatagcgccgtggagctgtcagcgcaaacacggcaggaagtggaagacttaatcaat
gagaaggaggcccagttcaaggctaaacaagaggagcagtcgcgccttctggatgaactc
gctggaaagctgcagagcctggatctctctgaggtggctgagaagacatgtggcactgct
ccgggagcctcctgtgccgagtccgagtgcggggggctgagctgtcggacagacgagggc
aagaagaagtgtggaggccccggctgcgacgggctggtgactgtagctcacaatgcctgg
cagaaggctatggattttgacagagacatcctcagtgcattagcagaagttgagcaactc
tccagaatggtttctgaggcaaaacagagagcagatgaagcaaaacaaaatgcacaagca
gtcttgcttaaaaccaatgctacaaaagaacaagtggacagaagcaatgaagatctgaga
aatcttattaaacagattagagacttcctaatgcaagacagcgctgacctggatagcatt
gaggcagtggctaatgaagtgctgaacatggagatgccaagcactccccagcagctgcag
gctctgacagaagatattcgtgagcgtgtagaaagcctttctgatgttgaggtcattttg
cagcagagcgctggagacattgccagagcagaaatgctactggaggaagctaaaagagcg
agcaaaggtgcaacggatgttaaagtcactgcagacatggtgaaagcagcactggaagaa
gctgaaaaagctcaaaatgcagctgaaaaagccatcaaacaagctgatgaagatattaaa
ggaactcaagacctgctgacttcgattgaatctgaaaatgcagcatctgcagaaacgctg
aacaatgctaccttacgtctgtttgagctagagaagagtgttgaagaccttaggcaaaag
gctactacaaattcagggaatgtgggaaatatagaagacaaaattattagtgcaaaacaa
aatgctgaagaagttaaaaaggtcctcaacaacgagctgagcggcaagtacagaaccgtg
gaagagctcattgccaagaagacggaggagtcggccgaggccaggaggaaagcaggcgtg
ttgcaagacgaagctaaagccttgttggctcaagcaaacagcaaactccagctgctcaaa
gatttggaaaatacatatgaaaacaatcaaaaagttctggaagacaaagccaagcagttg
gtggagctggaagagacagttcgctccctcttacagacaatcagccagaaggttgctgtt
tatagcacttgcttataa
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integrated database retrieval system
